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GEO accession:
Series GSE9011
Query DataSets for GSE9011
Status
Public on Oct 11, 2007
Title
Genome-wide in vivo binding analysis for PU.1 in RAW264.7 macrophages
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by genome tiling array
Summary
We used Affymetrix Mouse Promoter 1.0R arrays to analyse PU.1-dependent promoters in mouse macrophages
Keywords: PU.1 ChIP versus IgG ChIP, ChIP-Chip
Overall design
3 biological replicates of PU.1 and IgG Immunoprecipitation were performed each
Contributor(s)
Thomas L
Citation(s)
18687062
,
20709948
Submission date
Sep 11, 2007
Last update date
Oct 14, 2014
Contact name
Thomas Langmann
E-mail(s)
thomas.langmann@klinik.uni-regensburg.de
Phone
+49-941-944-5423
Fax
+49-941-944-5402
Organization name
Institute of Human Genetics
Department
University of Regensburg
Street address
Franz-Josef-Strauss-Allee 11
City
Regensburg
ZIP/Postal code
93042
Country
Germany
Platforms (1)
GPL5811
[Mm_PromPR] Affymetrix Mouse Promoter 1.0R Array
Samples (1)
GSM228764
PU.1 ChIP versus IgG ChIP
Relations
BioProject
PRJNA102497
Significant promoters RAW264.7 PU.1 vs IgG header descriptions
Nr.
Gene_ID
Gene_ID
Gene_Symbol
Log Ratio
Data table
Nr.
Gene_ID
Gene_ID
Gene_Symbol
Log Ratio
1
XM_896247
68364
0610030E20Rik
1.678
2
XR_002369
67674
0610038D11Rik
2.791
3
AK003812
76311
1110019D14Rik
1.841
4
XM_906738
68512
1110019J04Rik
1.634
5
NM_197979
66152
1110020P15Rik
1.424
6
NM_172866
242406
1110029E03Rik
2.214
7
AK004043
68742
1110032O16Rik
2.413
8
NM_027269
109065
1110034A24Rik
1.968
9
AK166513
68684
1110035D15Rik
1.744
10
NM_001081158
74148
1300001I01Rik
2.259
11
NM_028788
74152
1300002K09Rik
1.778
12
XM_986779
68952
1500016O10Rik
1.705
13
AK158384
77661
1520401O13Rik
2.146
14
AK005592
67503
1700001G17Rik
2.17
15
AK005738
74173
1700012B15Rik
2.552
16
AK006012
69427
1700016B15Rik
1.79
17
AK006171
75637
1700020L05Rik
2.066
18
XM_982268
75623
1700029F09Rik
1.9
19
NM_001033148
69479
1700029J07Rik
1.929
20
AK006537
69515
1700030E10Rik
1.631
Total number of rows:
1202
Table truncated, full table size
39 Kbytes
.
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Supplementary file
Size
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File type/resource
GSE9011_RAW.tar
560.0 Mb
(http)
(custom)
TAR (of BAR, BED, CEL, TXT)
Processed data provided as supplementary file
Processed data are available on Series record
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