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Series GSE90055 Query DataSets for GSE90055
Status Public on Nov 19, 2016
Title Allelic expression in tibial growth plates from 21 day old C57BL/6J x CAST/EiJ F1s
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We have identified candidate genes from the Feml2 QTL influencing femur length through allele specific expression analysis of growth plates in C57BL/6J x CAST/EiJ F1 hybrids. This work provides the foundation to identify novel genes affecting bone geometry.
Overall design total RNA sequencing in 7 male C57BL/6JxCAST F1s
Contributor(s) Farber CR, Medrano JF, Sabik OL
Citation(s) 28082324
Submission date Nov 18, 2016
Last update date May 15, 2019
Contact name Charles R Farber
Organization name University of Virginia
Department Center for Public Health Genomics
Lab Farber Lab
Street address PO Box 800717
City Charlottesville
State/province VA
ZIP/Postal code 22908
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (7)
GSM2396702 Chondrocyte_Ms1
GSM2396703 Chondrocyte_Ms2
GSM2396704 Chondrocyte_Ms3
BioProject PRJNA354390
SRA SRP093643

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE90055_RAW.tar 3.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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