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Series GSE89743 Query DataSets for GSE89743
Status Public on Aug 01, 2017
Title Genome-wide maps of FoxP3 binding in FoxP3WT and FoxP3A384T Treg cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary FoxP3 binding sites in Treg cells expressing WT or A384T mutant FoxP3 were examined.
Overall design Chromatin was prepared from FoxP3+ Treg cells from FoxP3WT and FoxP3A384T mice, immunoprecipitated with anti-FoxP3 antibody, and the bound DNA were subjected to deep sequencing.
Contributor(s) Hayatsu N, Hori S
Citation(s) 28778586
Submission date Nov 10, 2016
Last update date May 15, 2019
Contact name Shohei Hori
Phone +81-45-503-7069
Organization name RIKEN Center for Integrative Medical Sciences
Lab Laboratory for Immune Homeostasis
Street address 1-7-22 Suehiro-cho, Tsurumi-ku
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (12)
GSM2387500 WT Treg_1 (ChIP-seq)
GSM2387501 WT Treg_2 (ChIP-seq)
GSM2387502 WT Treg_3 (ChIP-seq)
This SubSeries is part of SuperSeries:
GSE89744 Analyses of a mutant FoxP3 allele reveal BATF as a critical transcription factor in the differentiation and accumulation of tissue regulatory T cells
BioProject PRJNA353072
SRA SRP093271

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89743_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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