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Series GSE89698 Query DataSets for GSE89698
Status Public on Nov 01, 2017
Title A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 29100015
Submission date Nov 09, 2016
Last update date Jul 25, 2021
Contact name Felix Krueger
E-mail(s) fkrueger@altoslabs.com
Organization name Altos Labs
Department Bioinformatics
Street address Granta Park
City Cambridge
ZIP/Postal code CB21 6GP
Country United Kingdom
 
Platforms (3)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL16417 Illumina MiSeq (Mus musculus)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (189)
GSM2386835 ChIP-seq_H3K27me3_d4.1_control
GSM2386836 ChIP-seq_H3K27me3_d4.1_DNMT1KO
GSM2386837 ChIP-seq_H3K27me3_d8.1_control
This SuperSeries is composed of the following SubSeries:
GSE89694 A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells [ChIP-Seq]
GSE89695 A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells [RNA-Seq]
GSE89696 A transposon sensor during epigenetic reprogramming consists of pervasive transcription and endosiRNAs in mouse ES cells [smallRNA-Seq]
Relations
BioProject PRJNA352969

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89698_RAW.tar 668.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp

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