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Series GSE89418 Query DataSets for GSE89418
Status Public on Jan 01, 2018
Title EZH1 as a key epigenetic barrier to definitive haematopoiesis during embryonic development
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 29342143
Submission date Nov 02, 2016
Last update date May 15, 2019
Contact name Melissa Kinney
Organization name Boston Children's Hospital
Street address 1 Blackfan Circle
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
Platforms (4)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (58)
GSM2371275 34-iPS 5F +shEZH1 D4 day 4 rep 1
GSM2371276 34-iPS 5F +shEZH1 D6 day 4 rep 1
GSM2371277 MSC-iPS 5F +shEZH1 D4 day 4 rep 1
This SuperSeries is composed of the following SubSeries:
GSE89415 RNA-seq analysis of EZH1 knockdown in 5F cells, or EZH1 heterozygous and homozygous knockout YS and AGM cells
GSE89416 ATAC-seq analysis in 5F cells and AGM cells with EZH1 depletion
GSE89417 ChIP-seq analysis of EZH1, H3K4me3 and H3K27me3 in 5F cells
BioProject PRJNA352132

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89418_RAW.tar 4.9 Gb (http)(custom) TAR (of BED, TXT, WIG)
SRA Run SelectorHelp

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