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Series GSE89237 Query DataSets for GSE89237
Status Public on Dec 19, 2016
Title UMI-based, single cell RNA sequencing of human nasal epithelial cells grown for 33 days at air liquid interface
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary 5' selective RNA-seq of 96 single cells from human nasal epithelial cells. Cells grown for 33 days at an air liquid interface. RNAseq profiling was performed with N4H4 unique molecular identifiers processed on a Fluidigm C1. Sequencing was performed on a Ion Proton (Life Technologies).
Overall design Single cell from human nasal epithelium. 5' selective RNAseq profiling, 96 cells, unique molecular identifiers, custom library preparation.
Contributor(s) Arguel MJ, Lebrigand K, Paquet A, Ruiz-Garcia S, Zaragosi LE, Barbry P, Waldmann R
Citation(s) 27940562
Submission date Oct 27, 2016
Last update date May 15, 2019
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (96)
GSM2362698 PRO20150916_C1_1
GSM2362699 PRO20150916_C1_2
GSM2362700 PRO20150916_C1_3
This SubSeries is part of SuperSeries:
GSE79136 A cost effective single cell RNA sequencing approach for the Fluidigm C1
BioProject PRJNA350800
SRA SRP092181

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89237_PRO20150916_C1_dge_ed1.txt.gz 330.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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