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Series GSE89014 Query DataSets for GSE89014
Status Public on Aug 11, 2017
Title cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal is to profile cFos binding sites in an p53 knockout mouse bone marrow-derived stem cells (mBMSCs).
 
Overall design Four single clones (clone2, 4, 8, 12) of p53 knockout (p53KO) mouse bone marrow-derived mesenchymal stem cells were transduced with retroviruses expressing either luciferase (Luc) or cFos cDNAs. RNA was extracted from cells and subject to RNAseq.
 
Contributor(s) Huang J
Citation(s) 28552607
Submission date Oct 21, 2016
Last update date May 15, 2019
Contact name Jing Huang
E-mail(s) huangj3@mail.nih.gov
Organization name National Cancer Institute
Lab Cancer Biology and Genetics
Street address 37 Convent Dr. 37/3140
City Bethesda
State/province MD
ZIP/Postal code MD 20892
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (8)
GSM2357407 p53KO_mBMSCs_clone2_Luc
GSM2357408 p53KO_mBMSCs_clone2_cFos
GSM2357409 p53KO_mBMSCs_clone4_Luc
This SubSeries is part of SuperSeries:
GSE89015 cFos-Sox9 Axis Reprograms Bone Marrow-derived Mesenchymal Stem Cells into Chondroblastic Osteosarcoma
Relations
BioProject PRJNA349803
SRA SRP091903

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE89014_RAW.tar 7.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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