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Series GSE88915 Query DataSets for GSE88915
Status Public on Feb 22, 2017
Title Depletion of tRNA-halves enables effective small RNA sequencing of low-input murine serum samples
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 27901112
Submission date Oct 18, 2016
Last update date May 15, 2019
Contact name Alan Van Goethem
Organization name Ghent University
Street address De Pintelaan 185
City Ghent
ZIP/Postal code 9000
Country Belgium
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (27)
GSM2344861 NCr Mouse 1046. TimePoint 1.tRNA dep
GSM2344862 NCr Mouse 1046. TimePoint 1.tRNA undep
GSM2344863 NCr Mouse 1047. TimePoint 1.tRNA dep
This SuperSeries is composed of the following SubSeries:
GSE88728 Small RNA sequencing of serum collected from mice before and after manifestation of tumor
GSE88913 Small RNA sequencing of serum-derived RNA for the evaluation of 5' tRNA halves depletion protocols
GSE88914 Evaluation of three small RNA library preparation kits on serum-derived RNA
BioProject PRJNA349073

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE88915_RAW.tar 1.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp

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