GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE87772 Query DataSets for GSE87772
Status Public on Oct 09, 2019
Title Expression data from HEK293T cells transfected with pNTAP-2×flag-VRTN or empty vectors
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To further investigate whether VRTN is a transcription factor, we examined global transcriptomic changes in human HEK293T cells after treating them with VRTN using whole-genome microarrays containing 28,869 oligonucleotide probes.
Overall design The total RNA was extracted from HEK293T transfected with pNTAP-2×flag-VRTN (3 replicates) or empty vectors (3 replicates) and hybridized on Affymetrix microarrays.
Contributor(s) Duan Y, Zhang H, Zhang Z, Gao J, Yang J, Wu Z, Fan Y, Xing Y, Li L, Xiao S, Ren J, Huang L
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Oct 08, 2016
Last update date Oct 10, 2019
Contact name Yanyu Dean
Phone 86-791-83813080
Organization name Jiangxi Agricultural University
Lab State Key Laboratory of Pig Genetic Improvement and Production Technology
Street address Lushanzhong888, Changbei district
City Nanchang
ZIP/Postal code 330044
Country China
Platforms (1)
GPL6244 [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM2340108 HEK293T transfected with pNTAP-2×flag-VRTN, biological replicate 1
GSM2340109 HEK293T transfected with pNTAP-2×flag-VRTN, biological replicate 2
GSM2340110 HEK293T transfected with pNTAP-2×flag-VRTN, biological replicate 3
This SubSeries is part of SuperSeries:
GSE87776 VRTN Regulates the Number of Thoracic Vertebrae During Vertebrate Development
BioProject PRJNA347479

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE87772_RAW.tar 24.6 Mb (http)(custom) TAR (of CEL)
GSE87772_normalized_data_with_transcript_ID.txt.gz 3.3 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap