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GEO accession:
Series GSE87049
Query DataSets for GSE87049
Status
Public on Aug 31, 2018
Title
Analysis of somatic DNA copy number alterations and frequency of breast cancer intrinsic subtypes from Mexican women
Organism
Homo sapiens
Experiment type
Expression profiling by array
Genome variation profiling by SNP array
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33854067
Submission date
Sep 17, 2016
Last update date
May 06, 2021
Contact name
Sandra Lorena Romero-Cordoba
E-mail(s)
sromero_cordoba@hotmail.com
Organization name
National Instute of Genomic Medicine
Department
Cancer Genomics
Street address
Periférico Sur No. 4809, Col. Arenal Tepepan, Delegación Tlalpan. México, D.F.
City
Mexico
State/province
Mexico
ZIP/Postal code
14610
Country
Mexico
Platforms (2)
GPL6244
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version]
GPL6801
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (359)
Less...
More...
GSM2301021
Breast cancer tissue [AT4]
GSM2301022
Breast cancer tissue [AT7]
GSM2301023
Breast cancer tissue [AT24]
GSM2301024
Breast cancer tissue [AT26]
GSM2301025
Breast cancer tissue [AT27]
GSM2301026
Breast cancer tissue [AT28]
GSM2301027
Breast cancer tissue [AT29]
GSM2301028
Breast cancer tissue [AT30]
GSM2301029
Breast cancer tissue [AT34]
GSM2301030
Breast cancer tissue [AT36]
GSM2301031
Breast cancer tissue [AT37]
GSM2301032
Breast cancer tissue [AT40]
GSM2301033
Breast cancer tissue [AT41]
GSM2301034
Breast cancer tissue [AT50]
GSM2301035
Breast cancer tissue [AT59]
GSM2301036
Breast cancer tissue [AT62]
GSM2301037
Breast cancer tissue [AT69]
GSM2301038
Breast cancer tissue [AT71]
GSM2301039
Breast cancer tissue [AT74]
GSM2301040
Breast cancer tissue [AT81]
GSM2301041
Breast cancer tissue [AT83]
GSM2301042
Breast cancer tissue [AT98]
GSM2301043
Breast cancer tissue [AT106]
GSM2301044
Breast cancer tissue [AT110]
GSM2301045
Breast cancer tissue [AT124]
GSM2301046
Breast cancer tissue [AT125]
GSM2301047
Breast cancer tissue [AT129]
GSM2301048
Breast cancer tissue [AT135]
GSM2301049
Breast cancer tissue [AT141]
GSM2301050
Breast cancer tissue [AT154]
GSM2301051
Breast cancer tissue [AT160]
GSM2301052
Breast cancer tissue [AT165]
GSM2301053
Breast cancer tissue [AT167]
GSM2301054
Breast cancer tissue [AT169]
GSM2301055
Breast cancer tissue [AT170]
GSM2301056
Breast cancer tissue [AT171]
GSM2301057
Breast cancer tissue [AT172]
GSM2301058
Breast cancer tissue [AT178]
GSM2301059
Breast cancer tissue [AT183]
GSM2301060
Breast cancer tissue [AT184]
GSM2301061
Breast cancer tissue [AT187]
GSM2301062
Breast cancer tissue [AT190]
GSM2301063
Breast cancer tissue [AT192]
GSM2301064
Breast cancer tissue [AT194]
GSM2301065
Breast cancer tissue [AT200]
GSM2301066
Breast cancer tissue [AT203]
GSM2301067
Breast cancer tissue [AT206]
GSM2301068
Breast cancer tissue [AT212]
GSM2301069
Breast cancer tissue [AT229]
GSM2301070
Breast cancer tissue [AT244]
GSM2301071
Breast cancer tissue [BaT3]
GSM2301072
Breast cancer tissue [BaT45]
GSM2301073
Breast cancer tissue [BaT97]
GSM2301074
Breast cancer tissue [BaT120]
GSM2301075
Breast cancer tissue [BaT122]
GSM2301076
Breast cancer tissue [BaT140]
GSM2301077
Breast cancer tissue [BaT144]
GSM2301078
Breast cancer tissue [BaT162]
GSM2301079
Breast cancer tissue [BaT174]
GSM2301080
Breast cancer tissue [BaT189]
GSM2301081
Breast cancer tissue [BaT195]
GSM2301082
Breast cancer tissue [BaT201]
GSM2301083
Breast cancer tissue [BaT249]
GSM2301084
Breast cancer tissue [BaT250]
GSM2301085
Breast cancer tissue [BT6]
GSM2301086
Breast cancer tissue [BT13]
GSM2301087
Breast cancer tissue [BT16]
GSM2301088
Breast cancer tissue [BT38]
GSM2301089
Breast cancer tissue [BT55]
GSM2301090
Breast cancer tissue [BT73]
GSM2301091
Breast cancer tissue [BT79]
GSM2301092
Breast cancer tissue [BT82]
GSM2301093
Breast cancer tissue [BT94]
GSM2301094
Breast cancer tissue [BT105]
GSM2301095
Breast cancer tissue [BT116]
GSM2301096
Breast cancer tissue [BT123]
GSM2301097
Breast cancer tissue [BT126]
GSM2301098
Breast cancer tissue [BT137]
GSM2301099
Breast cancer tissue [BT149]
GSM2301100
Breast cancer tissue [BT150]
GSM2301101
Breast cancer tissue [BT158]
GSM2301102
Breast cancer tissue [BT159]
GSM2301103
Breast cancer tissue [BT176]
GSM2301104
Breast cancer tissue [BT186]
GSM2301105
Breast cancer tissue [BT196]
GSM2301106
Breast cancer tissue [BT213]
GSM2301107
Breast cancer tissue [BT218]
GSM2301108
Breast cancer tissue [BT227]
GSM2301109
Breast cancer tissue [BT232]
GSM2301110
Breast cancer tissue [BT239]
GSM2301111
Breast cancer tissue [BT248]
GSM2301112
Breast cancer tissue [HT5]
GSM2301113
Breast cancer tissue [HT15]
GSM2301114
Breast cancer tissue [HT47]
GSM2301115
Breast cancer tissue [HT75]
GSM2301116
Breast cancer tissue [HT76]
GSM2301117
Breast cancer tissue [HT78]
GSM2301118
Breast cancer tissue [HT85]
GSM2301119
Breast cancer tissue [HT95]
GSM2301120
Breast cancer tissue [HT108]
GSM2301121
Breast cancer tissue [HT146]
GSM2301122
Breast cancer tissue [HT166]
GSM2301123
Breast cancer tissue [HT191]
GSM2301124
Breast cancer tissue [HT193]
GSM2301125
Breast cancer tissue [HT209]
GSM2301126
Breast cancer tissue [HT215]
GSM2301127
Breast cancer tissue [HT226]
GSM2301128
Breast cancer tissue [HT230]
GSM2301129
Breast cancer tissue [HT234]
GSM2301130
Breast cancer tissue [NT1]
GSM2301131
Breast cancer tissue [NT17]
GSM2301132
Breast cancer tissue [NT31]
GSM2301133
Breast cancer tissue [NT43]
GSM2301134
Breast cancer tissue [NT44]
GSM2301135
Breast cancer tissue [NT48]
GSM2301136
Breast cancer tissue [NT58]
GSM2301137
Breast cancer tissue [NT80]
GSM2301138
Breast cancer tissue [NT138]
GSM2301139
Breast cancer tissue [NT142]
GSM2301140
Breast cancer tissue [NT143]
GSM2301141
Breast cancer tissue [NT168]
GSM2301142
Breast cancer tissue [NT198]
GSM2301143
Breast cancer tissue [NT204]
GSM2301144
Breast cancer tissue [T175]
GSM2301145
Normal adjacent tissue [C5]
GSM2301146
Normal adjacent tissue [C6]
GSM2301147
Normal adjacent tissue [C13]
GSM2301148
Normal adjacent tissue [C14]
GSM2301149
Normal adjacent tissue [C15]
GSM2301150
Normal adjacent tissue [C28]
GSM2301151
Normal adjacent tissue [C29]
GSM2301152
Normal adjacent tissue [C36]
GSM2301153
Normal adjacent tissue [C37]
GSM2301154
Normal adjacent tissue [C38]
GSM2301155
Normal adjacent tissue [C39]
GSM2301156
Normal adjacent tissue [C41]
GSM2301157
Normal adjacent tissue [C45]
GSM2301158
Normal adjacent tissue [C48]
GSM2301159
Normal adjacent tissue [C59]
GSM2301160
Normal adjacent tissue [C62]
GSM2301161
Normal adjacent tissue [C71]
GSM2301162
Normal adjacent tissue [C74]
GSM2301163
Normal adjacent tissue [C75]
GSM2301164
Normal adjacent tissue [C80]
GSM2301165
Normal adjacent tissue [C81]
GSM2301166
Normal adjacent tissue [C85]
GSM2301167
Normal adjacent tissue [C105]
GSM2301168
Normal adjacent tissue [C106]
GSM2301169
Normal adjacent tissue [C110]
GSM2301170
Normal adjacent tissue [C124]
GSM2301171
Normal adjacent tissue [C125]
GSM2301172
Normal adjacent tissue [C150]
GSM2301173
Normal adjacent tissue [C160]
GSM2301174
Normal adjacent tissue [C167]
GSM2301175
Normal adjacent tissue [C168]
GSM2301176
Normal adjacent tissue [C171]
GSM2301177
Normal adjacent tissue [C184]
GSM2301178
Normal adjacent tissue [C190]
GSM2301179
Normal adjacent tissue [C198]
GSM2319736
Buffy coat from peripheral blood [C1] copy number
GSM2319737
Buffy coat from peripheral blood [C2] copy number
GSM2319738
Buffy coat from peripheral blood [C4] copy number
GSM2319739
Buffy coat from peripheral blood [C5] copy number
GSM2319740
Buffy coat from peripheral blood [C6] copy number
GSM2319741
Buffy coat from peripheral blood [C9] copy number
GSM2319742
Buffy coat from peripheral blood [C13] copy number
GSM2319743
Buffy coat from peripheral blood [C15] copy number
GSM2319744
Buffy coat from peripheral blood [C16] copy number
GSM2319745
Buffy coat from peripheral blood [C17] copy number
GSM2319746
Buffy coat from peripheral blood [C18] copy number
GSM2319747
Buffy coat from peripheral blood [C26] copy number
GSM2319748
Buffy coat from peripheral blood [C27] copy number
GSM2319749
Buffy coat from peripheral blood [C28] copy number
GSM2319750
Buffy coat from peripheral blood [C29] copy number
GSM2319751
Buffy coat from peripheral blood [C30] copy number
GSM2319752
Buffy coat from peripheral blood [C31] copy number
GSM2319753
Buffy coat from peripheral blood [C34] copy number
GSM2319754
Buffy coat from peripheral blood [C36] copy number
GSM2319755
Buffy coat from peripheral blood [C37] copy number
GSM2319756
Buffy coat from peripheral blood [C38] copy number
GSM2319757
Buffy coat from peripheral blood [C39] copy number
GSM2319758
Buffy coat from peripheral blood [C40] copy number
GSM2319759
Buffy coat from peripheral blood [C41] copy number
GSM2319760
Buffy coat from peripheral blood [C43] copy number
GSM2319761
Buffy coat from peripheral blood [C44] copy number
GSM2319762
Buffy coat from peripheral blood [C45] copy number
GSM2319763
Buffy coat from peripheral blood [C47] copy number
GSM2319764
Buffy coat from peripheral blood [C48] copy number
GSM2319765
Buffy coat from peripheral blood [C50] copy number
GSM2319766
Buffy coat from peripheral blood [C55] copy number
GSM2319767
Buffy coat from peripheral blood [C58] copy number
GSM2319768
Buffy coat from peripheral blood [C59] copy number
GSM2319769
Buffy coat from peripheral blood [C62] copy number
GSM2319770
Buffy coat from peripheral blood [C69] copy number
GSM2319771
Buffy coat from peripheral blood [C71] copy number
GSM2319772
Buffy coat from peripheral blood [C73] copy number
GSM2319773
Buffy coat from peripheral blood [C74] copy number
GSM2319774
Buffy coat from peripheral blood [C75] copy number
GSM2319775
Buffy coat from peripheral blood [C76] copy number
GSM2319776
Buffy coat from peripheral blood [C77] copy number
GSM2319777
Buffy coat from peripheral blood [C79] copy number
GSM2319778
Buffy coat from peripheral blood [C80] copy number
GSM2319779
Buffy coat from peripheral blood [C81] copy number
GSM2319780
Buffy coat from peripheral blood [C82] copy number
GSM2319781
Buffy coat from peripheral blood [C83] copy number
GSM2319782
Buffy coat from peripheral blood [C85] copy number
GSM2319783
Buffy coat from peripheral blood [C94] copy number
GSM2319784
Buffy coat from peripheral blood [C95] copy number
GSM2319785
Buffy coat from peripheral blood [C97] copy number
GSM2319786
Buffy coat from peripheral blood [C98] copy number
GSM2319787
Buffy coat from peripheral blood [C105] copy number
GSM2319788
Buffy coat from peripheral blood [C106] copy number
GSM2319789
Buffy coat from peripheral blood [C108] copy number
GSM2319790
Buffy coat from peripheral blood [C110] copy number
GSM2319791
Buffy coat from peripheral blood [C113] copy number
GSM2319792
Buffy coat from peripheral blood [C116] copy number
GSM2319793
Buffy coat from peripheral blood [C120] copy number
GSM2319794
Buffy coat from peripheral blood [C121] copy number
GSM2319795
Buffy coat from peripheral blood [C122] copy number
GSM2319796
Buffy coat from peripheral blood [C123] copy number
GSM2319797
Buffy coat from peripheral blood [C124] copy number
GSM2319798
Buffy coat from peripheral blood [C125] copy number
GSM2319799
Buffy coat from peripheral blood [C126] copy number
GSM2319800
Buffy coat from peripheral blood [C129] copy number
GSM2319801
Buffy coat from peripheral blood [C135] copy number
GSM2319802
Buffy coat from peripheral blood [C137] copy number
GSM2319803
Buffy coat from peripheral blood [C138] copy number
GSM2319804
Buffy coat from peripheral blood [C140] copy number
GSM2319805
Buffy coat from peripheral blood [C141] copy number
GSM2319806
Buffy coat from peripheral blood [C142] copy number
GSM2319807
Buffy coat from peripheral blood [C143] copy number
GSM2319808
Buffy coat from peripheral blood [C144] copy number
GSM2319809
Buffy coat from peripheral blood [C146] copy number
GSM2319810
Buffy coat from peripheral blood [C149] copy number
GSM2319811
Buffy coat from peripheral blood [C150] copy number
GSM2319812
Buffy coat from peripheral blood [C154] copy number
GSM2319813
Buffy coat from peripheral blood [C155] copy number
GSM2319814
Buffy coat from peripheral blood [C160] copy number
GSM2319815
Buffy coat from peripheral blood [C165] copy number
GSM2319816
Buffy coat from peripheral blood [C166] copy number
GSM2319817
Buffy coat from peripheral blood [C168] copy number
GSM2319818
Buffy coat from peripheral blood [C169] copy number
GSM2319819
Buffy coat from peripheral blood [C172] copy number
GSM2319820
Buffy coat from peripheral blood [C174] copy number
GSM2319821
Buffy coat from peripheral blood [C175] copy number
GSM2319822
Buffy coat from peripheral blood [C176] copy number
GSM2319823
Buffy coat from peripheral blood [C178] copy number
GSM2319824
Buffy coat from peripheral blood [C184] copy number
GSM2319825
Buffy coat from peripheral blood [C186] copy number
GSM2319826
Buffy coat from peripheral blood [C187] copy number
GSM2319827
Buffy coat from peripheral blood [C189] copy number
GSM2319828
Buffy coat from peripheral blood [C190] copy number
GSM2319829
Buffy coat from peripheral blood [C191] copy number
GSM2319830
Buffy coat from peripheral blood [C192] copy number
GSM2319831
Buffy coat from peripheral blood [C193] copy number
GSM2319832
Buffy coat from peripheral blood [C194] copy number
GSM2319833
Buffy coat from peripheral blood [C196] copy number
GSM2319834
Buffy coat from peripheral blood [C198] copy number
GSM2319835
Buffy coat from peripheral blood [C200] copy number
GSM2319836
Breast cancer tissue [T1] copy number
GSM2319837
Breast cancer tissue [T2] copy number
GSM2319838
Breast cancer tissue [T4] copy number
GSM2319839
Breast cancer tissue [T5] copy number
GSM2319840
Breast cancer tissue [T6] copy number
GSM2319841
Breast cancer tissue [T9] copy number
GSM2319842
Breast cancer tissue [T13] copy number
GSM2319843
Breast cancer tissue [T15] copy number
GSM2319844
Breast cancer tissue [T16] copy number
GSM2319845
Breast cancer tissue [T17] copy number
GSM2319846
Breast cancer tissue [T18] copy number
GSM2319847
Breast cancer tissue [T26] copy number
GSM2319848
Breast cancer tissue [T27] copy number
GSM2319849
Breast cancer tissue [T28] copy number
GSM2319850
Breast cancer tissue [T29] copy number
GSM2319851
Breast cancer tissue [T30] copy number
GSM2319852
Breast cancer tissue [T31] copy number
GSM2319853
Breast cancer tissue [T34] copy number
GSM2319854
Breast cancer tissue [T36] copy number
GSM2319855
Breast cancer tissue [T37] copy number
GSM2319856
Breast cancer tissue [T38] copy number
GSM2319857
Breast cancer tissue [T39] copy number
GSM2319858
Breast cancer tissue [T40] copy number
GSM2319859
Breast cancer tissue [T41] copy number
GSM2319860
Breast cancer tissue [T43] copy number
GSM2319861
Breast cancer tissue [T44] copy number
GSM2319862
Breast cancer tissue [T45] copy number
GSM2319863
Breast cancer tissue [T47] copy number
GSM2319864
Breast cancer tissue [T48] copy number
GSM2319865
Breast cancer tissue [T50] copy number
GSM2319866
Breast cancer tissue [T55] copy number
GSM2319867
Breast cancer tissue [T58] copy number
GSM2319868
Breast cancer tissue [T59] copy number
GSM2319869
Breast cancer tissue [T62] copy number
GSM2319870
Breast cancer tissue [T69] copy number
GSM2319871
Breast cancer tissue [T71] copy number
GSM2319872
Breast cancer tissue [T73] copy number
GSM2319873
Breast cancer tissue [T74] copy number
GSM2319874
Breast cancer tissue [T75] copy number
GSM2319875
Breast cancer tissue [T76] copy number
GSM2319876
Breast cancer tissue [T77] copy number
GSM2319877
Breast cancer tissue [T79] copy number
GSM2319878
Breast cancer tissue [T80] copy number
GSM2319879
Breast cancer tissue [T81] copy number
GSM2319880
Breast cancer tissue [T82] copy number
GSM2319881
Breast cancer tissue [T83] copy number
GSM2319882
Breast cancer tissue [T85] copy number
GSM2319883
Breast cancer tissue [T94] copy number
GSM2319884
Breast cancer tissue [T95] copy number
GSM2319885
Breast cancer tissue [T97] copy number
GSM2319886
Breast cancer tissue [T98] copy number
GSM2319887
Breast cancer tissue [T105] copy number
GSM2319888
Breast cancer tissue [T106] copy number
GSM2319889
Breast cancer tissue [T108] copy number
GSM2319890
Breast cancer tissue [T110] copy number
GSM2319891
Breast cancer tissue [T113] copy number
GSM2319892
Breast cancer tissue [T116] copy number
GSM2319893
Breast cancer tissue [T120] copy number
GSM2319894
Breast cancer tissue [T121] copy number
GSM2319895
Breast cancer tissue [T122] copy number
GSM2319896
Breast cancer tissue [T123] copy number
GSM2319897
Breast cancer tissue [T124] copy number
GSM2319898
Breast cancer tissue [T125] copy number
GSM2319899
Breast cancer tissue [T126] copy number
GSM2319900
Breast cancer tissue [T129] copy number
GSM2319901
Breast cancer tissue [T135] copy number
GSM2319902
Breast cancer tissue [T137] copy number
GSM2319903
Breast cancer tissue [T138] copy number
GSM2319904
Breast cancer tissue [T140] copy number
GSM2319905
Breast cancer tissue [T141] copy number
GSM2319906
Breast cancer tissue [T142] copy number
GSM2319907
Breast cancer tissue [T143] copy number
GSM2319908
Breast cancer tissue [T144] copy number
GSM2319909
Breast cancer tissue [T146] copy number
GSM2319910
Breast cancer tissue [T149] copy number
GSM2319911
Breast cancer tissue [T150] copy number
GSM2319912
Breast cancer tissue [T154] copy number
GSM2319913
Breast cancer tissue [T155] copy number
GSM2319914
Breast cancer tissue [T160] copy number
GSM2319915
Breast cancer tissue [T165] copy number
GSM2319916
Breast cancer tissue [T166] copy number
GSM2319917
Breast cancer tissue [T168] copy number
GSM2319918
Breast cancer tissue [T169] copy number
GSM2319919
Breast cancer tissue [T172] copy number
GSM2319920
Breast cancer tissue [T174] copy number
GSM2319921
Breast cancer tissue [T175] copy number
GSM2319922
Breast cancer tissue [T176] copy number
GSM2319923
Breast cancer tissue [T178] copy number
GSM2319924
Breast cancer tissue [T184] copy number
GSM2319925
Breast cancer tissue [T186] copy number
GSM2319926
Breast cancer tissue [T187] copy number
GSM2319927
Breast cancer tissue [T189] copy number
GSM2319928
Breast cancer tissue [T190] copy number
GSM2319929
Breast cancer tissue [T191] copy number
GSM2319930
Breast cancer tissue [T192] copy number
GSM2319931
Breast cancer tissue [T193] copy number
GSM2319932
Breast cancer tissue [T194] copy number
GSM2319933
Breast cancer tissue [T196] copy number
GSM2319934
Breast cancer tissue [T198] copy number
GSM2319935
Breast cancer tissue [T200] copy number
This SuperSeries is composed of the following SubSeries:
GSE86374
Analysis of somatic DNA copy number alterations and frequency of breast cancer intrinsic subtypes from Mexican women [gene expression]
GSE87048
Analysis of somatic DNA copy number alterations and frequency of breast cancer intrinsic subtypes from Mexican women [copy number]
Relations
BioProject
PRJNA343311
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE87049_RAW.tar
12.1 Gb
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