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Series GSE86996 Query DataSets for GSE86996
Status Public on Mar 07, 2017
Title Histone modifications in primary intestinal epithelial cells from wild type (F/FUN) and intesinal NCoR1 deletion (ΔIECUN) neonates.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq analyses were carried out in intestinanl epithelial cells (IECs) isolated from F/FUN and ΔIECUN mice to assess histone modifications across the genome, an event that links the actions of corepressors with molecular insight towards a mechanism.
Overall design Examination of 6 different histone modifications in IECs with or without the presence of NCoR1.
Contributor(s) Chen S, Tukey RH
Citation(s) 28167773
Submission date Sep 16, 2016
Last update date May 15, 2019
Contact name Shujuan Chen
Phone 8588221351
Organization name University of California, San Diego
Department Pharmacology
Street address 9500 Gilman Drive
City La Jolla
State/province CA
ZIP/Postal code 92093
Country USA
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (16)
GSM2318609 WT_H3K4me1
GSM2318610 KO_H3K4me1
GSM2318611 WT_H3K4me3
BioProject PRJNA343188
SRA SRP089992

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86996_RAW.tar 406.5 Mb (http)(custom) TAR (of BEDGRAPH, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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