GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE86856 Query DataSets for GSE86856
Status Public on Mar 19, 2018
Title Genome-wide occupancy of LSD1 in differentiating C2C12 myoblasts.
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq analysis of LSD1 in C2C12 cells. We found that LSD1 directly regulates the expression of fiber and metabolism genes during myogenesis. Results provide insight into the molecular mechanisms of myogenesis.
Overall design Examination of LSD1/DNA interaction in C2C12 myoblasts 48 h post-differentiation.
Contributor(s) Anan K, Hino S, Nakao M
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Sep 13, 2016
Last update date May 15, 2019
Contact name Kotaro Anan
Phone +81-96-373-6801
Organization name Kumamoto University
Department Department of Medicall Cell Biology
Street address 2-2-1, Honjo, Chuo-ku
City Kumamoto
State/province Kumamoto
ZIP/Postal code 860-0811
Country Japan
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (2)
GSM2309436 LSD1
GSM2309437 input
BioProject PRJNA342782
SRA SRP089785

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86856_LSD1_vs_Input_Peaks_detected_by_MACS.bed.gz 167.3 Kb (ftp)(http) BED
SRA Run SelectorHelp
Processed data are available on Series record
Raw data are available in SRA

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap