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Series GSE86071 Query DataSets for GSE86071
Status Public on Oct 11, 2016
Title Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and Stat3f/f K5cre Skin Transcriptomes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Atopic dermatitis (AD) is a common chronic skin disease, affecting >15% of children and 2-10% of adults worldwide. Understanding pathogenic mechanisms of the onset and dynamic progression of AD is required to design its effective treatments. The kinetical analysis of transcriptome in a mouse AD model revealed the pathways that led a vulnerable background and were critical to the onset of disease progress.
Overall design Kinetical transcriptome analysis in keratinocyte specific Stat3 deficient mice
Contributor(s) Miyauchi K, Okada-Hatakeyama M, Tanaka R, Kubo M
Citation(s) 34867936
Submission date Aug 25, 2016
Last update date Dec 14, 2021
Contact name Kosuke Miyauchi
Organization name RIKEN Center for Integrative Medical Sciences
Street address 1-7-22 Suehiro-sho
City Yokohama
State/province Kanagawa
ZIP/Postal code 230-0045
Country Japan
Platforms (1)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (24)
GSM2292949 D1_2w
GSM2292953 D2_2w
GSM2292955 H1_2w
BioProject PRJNA340170
SRA SRP082974

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86071_RAW.tar 4.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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