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GEO accession:
Series GSE84795
Query DataSets for GSE84795
Status
Public on Dec 06, 2016
Title
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
27923844
Submission date
Jul 25, 2016
Last update date
Oct 29, 2019
Contact name
Guillaume Andrey
E-mail(s)
guillaume.andrey@unige.ch
Phone
+41223795703
Organization name
University of Geneva
Department
Department of Genetic Medicine and Development
Street address
Rue Michel-Servet 1
City
Geneva
ZIP/Postal code
1211
Country
Switzerland
Platforms (2)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (114)
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More...
GSM2251419
CC-FL-E105-Wt-Mm-Rep2
GSM2251421
CC-HL-E105-Wt-Mm-Rep2
GSM2251422
CC-MB-E105-Wt-Mm-Rep1
GSM2251423
CC-MB-E105-Wt-Mm-Rep2
GSM2251424
CC-FL-E115-Wt-Mm-Rep1
GSM2251425
CC-FL-E115-Wt-Mm-Rep2
GSM2251426
CC-HL-E115-Wt-Mm-Rep1
GSM2251427
CC-HL-E115-Wt-Mm-Rep2
GSM2251428
CC-FL-E135-Wt-Mm-Rep1
GSM2251429
CC-FL-E135-Wt-Mm-Rep2
GSM2251430
CC-HL-E135-Wt-Mm-Rep1
GSM2251431
CC-HL-E135-Wt-Mm-Rep2
GSM2251432
CTCF-FL-E105-Wt-Mm-Rep1-L7324-1
GSM2251433
CTCF-FL-E105-Wt-Mm-Rep2-L7325-1
GSM2251434
CTCF-FL-E115-Wt-Mm-Rep1-L8227-1
GSM2251435
CTCF-FL-E115-Wt-Mm-Rep2-L8229-1
GSM2251436
CTCF-FL-E135-Wt-Mm-Rep1-L8182-1
GSM2251437
CTCF-FL-E135-Wt-Mm-Rep2-L8183-1
GSM2251438
CTCF-HL-E105-Wt-Mm-Rep1-L7326-1
GSM2251439
CTCF-HL-E105-Wt-Mm-Rep2-L7327-1
GSM2251440
CTCF-HL-E115-Wt-Mm-Rep1-L8228-1
GSM2251441
CTCF-HL-E115-Wt-Mm-Rep2-L8230-1
GSM2251442
CTCF-HL-E135-Wt-Mm-Rep1-L8184-1
GSM2251443
CTCF-HL-E135-Wt-Mm-Rep2-L8185-1
GSM2251444
CTCF-MB-E105-Wt-Mm-Rep1-L8221-1
GSM2251445
CTCF-MB-E105-Wt-Mm-Rep2-L8222-1
GSM2251446
H3K4me1-FL-E105-Wt-Mm-Rep1-L4297
GSM2251447
H3K4me1-FL-E105-Wt-Mm-Rep2-L4862
GSM2251448
H3K4me1-FL-E115-Wt-Mm-Rep1-1774
GSM2251449
H3K4me1-FL-E115-Wt-Mm-Rep2-2066
GSM2251450
H3K4me1-FL-E135-Wt-Mm-Rep1-L7124
GSM2251451
H3K4me1-FL-E135-Wt-Mm-Rep2-L7125
GSM2251452
H3K4me1-HL-E105-Wt-Mm-Rep1-L4298
GSM2251453
H3K4me1-HL-E105-Wt-Mm-Rep2-L4879
GSM2251454
H3K4me1-HL-E115-Wt-Mm-Rep1-2058
GSM2251455
H3K4me1-HL-E115-Wt-Mm-Rep2-2479
GSM2251456
H3K4me1-HL-E135-Wt-Mm-Rep1-L6985
GSM2251457
H3K4me1-HL-E135-Wt-Mm-Rep2-L7126
GSM2251458
H3K4me1-MB-E105-Wt-Mm-Rep1-L6986
GSM2251459
H3K4me1-MB-E105-Wt-Mm-Rep2-L7129
GSM2251460
H3K4me3-FL-E105-Wt-Mm-Rep1-L4294
GSM2251461
H3K4me3-FL-E105-Wt-Mm-Rep2-L4876
GSM2251462
H3K4me3-FL-E115-Wt-Mm-Rep1-1776
GSM2251463
H3K4me3-FL-E115-Wt-Mm-Rep2-2068
GSM2251464
H3K4me3-FL-E135-Wt-Mm-Rep1-L7130
GSM2251465
H3K4me3-FL-E135-Wt-Mm-Rep2-L7131
GSM2251466
H3K4me3-HL-E105-Wt-Mm-Rep1-L4870
GSM2251467
H3K4me3-HL-E105-Wt-Mm-Rep2-L4881
GSM2251468
H3K4me3-HL-E115-Wt-Mm-Rep1-2060
GSM2251469
H3K4me3-HL-E115-Wt-Mm-Rep2-L6989
GSM2251470
H3K4me3-HL-E135-Wt-Mm-Rep1-L7132
GSM2251471
H3K4me3-HL-E135-Wt-Mm-Rep2-L7133
GSM2251472
H3K4me3-MB-E105-Wt-Mm-Rep1-L6990
GSM2251473
H3K4me3-MB-E105-Wt-Mm-Rep2-L7136
GSM2251474
H3K27Ac-FL-E105-Wt-Mm-Rep1-L4288
GSM2251475
H3K27Ac-FL-E105-Wt-Mm-Rep2-L4877
GSM2251476
H3K27Ac-FL-E115-Wt-Mm-Rep1-2070
GSM2251477
H3K27Ac-FL-E115-Wt-Mm-Rep2-L6983
GSM2251478
H3K27Ac-FL-E135-Wt-Mm-Rep1-L7109
GSM2251479
H3K27Ac-FL-E135-Wt-Mm-Rep2-L7110
GSM2251480
H3K27Ac-HL-E105-Wt-Mm-Rep1-L4289
GSM2251481
H3K27Ac-HL-E105-Wt-Mm-Rep2-L4871
GSM2251482
H3K27Ac-HL-E115-Wt-Mm-Rep1-2062
GSM2251483
H3K27Ac-HL-E115-Wt-Mm-Rep2-2481
GSM2251484
H3K27Ac-HL-E135-Wt-Mm-Rep1-L6984
GSM2251485
H3K27Ac-HL-E135-Wt-Mm-Rep2-L7111
GSM2251486
H3K27Ac-MB-E105-Wt-Mm-Rep1-L7114
GSM2251487
H3K27Ac-MB-E105-Wt-Mm-Rep2-L7323
GSM2251488
H3K27me3-FL-E105-Wt-Mm-Rep1-L4291
GSM2251489
H3K27me3-FL-E105-Wt-Mm-Rep2-L4878
GSM2251490
H3K27me3-FL-E115-Wt-Mm-Rep1-2069
GSM2251491
H3K27me3-FL-E115-Wt-Mm-Rep2-L6987
GSM2251492
H3K27me3-FL-E135-Wt-Mm-Rep1-L7116
GSM2251493
H3K27me3-FL-E135-Wt-Mm-Rep2-L7117
GSM2251494
H3K27me3-HL-E105-Wt-Mm-Rep1-L4292
GSM2251495
H3K27me3-HL-E105-Wt-Mm-Rep2-L4883
GSM2251496
H3K27me3-HL-E115-Wt-Mm-Rep1-2061
GSM2251497
H3K27me3-HL-E115-Wt-Mm-Rep2-L6988
GSM2251498
H3K27me3-HL-E135-Wt-Mm-Rep1-L7118
GSM2251499
H3K27me3-HL-E135-Wt-Mm-Rep2-L7119
GSM2251500
H3K27me3-MB-E105-Wt-Mm-Rep1-L7122
GSM2251501
H3K27me3-MB-E105-Wt-Mm-Rep2-L7123
GSM2251502
RAD21-FL-E105-Wt-Mm-Rep1-L8215-1
GSM2251503
RAD21-FL-E105-Wt-Mm-Rep2-L8218-1
GSM2251504
RAD21-FL-E115-Wt-Mm-Rep1-L8223-1
GSM2251505
RAD21-FL-E115-Wt-Mm-Rep2-L8225-1
GSM2251506
RAD21-FL-E135-Wt-Mm-Rep1-L8189-1
GSM2251507
RAD21-FL-E135-Wt-Mm-Rep2-L8260-1
GSM2251508
RAD21-HL-E105-Wt-Mm-Rep1-L8216-1
GSM2251509
RAD21-HL-E105-Wt-Mm-Rep2-L8219-1
GSM2251510
RAD21-HL-E115-Wt-Mm-Rep1-L8224-1
GSM2251511
RAD21-HL-E115-Wt-Mm-Rep2-L8226-1
GSM2251512
RAD21-HL-E135-Wt-Mm-Rep1-L8190-1
GSM2251513
RAD21-HL-E135-Wt-Mm-Rep2-L8191-1
GSM2251514
RAD21-MB-E105-Wt-Mm-Rep1-L8217-1
GSM2251515
RAD21-MB-E105-Wt-Mm-Rep2-L8220-1
GSM2251516
RNA-FL-E105-Wt-Mm-Rep1-L6496
GSM2251517
RNA-FL-E105-Wt-Mm-Rep2-L6534
GSM2251518
RNA-FL-E115-Wt-Mm-Rep1-L6536
GSM2251519
RNA-FL-E115-Wt-Mm-Rep2-L6498
GSM2251520
RNA-FL-E135-Wt-Mm-Rep1-L6123
GSM2251521
RNA-FL-E135-Wt-Mm-Rep2-L6127
GSM2251522
RNA-HL-E105-Wt-Mm-Rep1-L6497
GSM2251523
RNA-HL-E105-Wt-Mm-Rep2-L6535
GSM2251524
RNA-HL-E115-Wt-Mm-Rep1-L6499
GSM2251525
RNA-HL-E115-Wt-Mm-Rep2-L6537
GSM2251526
RNA-HL-E135-Wt-Mm-Rep1-L6124
GSM2251527
RNA-HL-E135-Wt-Mm-Rep2-L6128
GSM2251528
RNA-MB-E105-Wt-Mm-Rep1-L6122
GSM2251529
RNA-MB-E105-Wt-Mm-Rep2-L6126
GSM2473963
CC-FL-E105-Wt-Mm-Rep1 part1
GSM2473964
CC-FL-E105-Wt-Mm-Rep1 part2
GSM2473965
CC-HL-E105-Wt-Mm-Rep1 part1
GSM2473966
CC-HL-E105-Wt-Mm-Rep1 part2
This SuperSeries is composed of the following SubSeries:
GSE84792
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding [Capture-C]
GSE84793
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding [ChIP-seq]
GSE84794
Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding [RNA-seq]
Relations
BioProject
PRJNA331156
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE84795_RAW.tar
29.0 Gb
(http)
(custom)
TAR (of BW, TAR)
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