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Series GSE84677 Query DataSets for GSE84677
Status Public on Mar 06, 2017
Title BCL11B DNA binding sites in progenitor and differentiated populations in the human thymus
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To define binding targets during thymopoiesis on a genome wide scale, we performed ChIP-Seq for BCL11B on two cell types isolated from the human thymus: the CD34+ progenitors and the more differentiated CD34- cells
Overall design ChIP-Seq for BCL11B binding was done on CD34+ and CD34- cells isolated from human thymus (n=2 biological replicates per cell type)
Contributor(s) Parekh C
Citation(s) 28232744
Submission date Jul 21, 2016
Last update date May 15, 2019
Contact name chintan parekh
Organization name Children's Hospital Los Angeles
Department Pediatrics
Street address 4650 sunset blvd, mail stop 54
City Los Angeles
State/province California
ZIP/Postal code 90027
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (8)
GSM2247490 CD34+ cells-replicate 1-IP
GSM2247491 CD34+ cells-replicate 1-control
GSM2247492 CD34- cells-replicate 1-IP
This SubSeries is part of SuperSeries:
GSE84678 BCL11B
BioProject PRJNA330818
SRA SRP079176

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84677_RAW.tar 1.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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