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Series GSE84484 Query DataSets for GSE84484
Status Public on Jul 18, 2016
Title Expression and alternative splicing data of cartilage endplate-derived stem cells (CESCs) under hypoxia or normoxia
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cartilage endplate-derived stem cells (CESCs) with chondro-osteogenic differentiation capacity may be responsible for the balance of chondrification and ossification in cartilage endplate (CEP). CEP is an avascular and hypoxic tissue, and hypoxia could influence the fate of CESCs.
We used high-throughput scanning to identify differentially expressed genes (DEGs) and alternatively spliced genes (ASGs) of CESCs under hypoxia compared to those under normoxia.
Overall design Human cartilage endplate-derived stem cells (CESCs) were cultured under normoxia and hypoxia for 21 days respectively.
Contributor(s) Yao Y
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Submission date Jul 17, 2016
Last update date Oct 29, 2018
Contact name Yuan Yao
Organization name Xinqiao Hospital, Third Military Medical University
Street address 83 Xinqiao Street, District of Shapingba
City Chongqing
ZIP/Postal code 400037
Country China
Platforms (2)
GPL17585 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [probe set (exon) version]
GPL17586 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
Samples (4)
GSM2237842 CESCs cultured under hypoxia [gene]
GSM2237843 CESCs cultured under normoxia [gene]
GSM2237844 CESCs cultured under hypoxia [alt-splice]
BioProject PRJNA329444

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84484_140411-131411B_3_HTA-2_0_.CEL.gz 24.0 Mb (ftp)(http) CEL
GSE84484_140411-131411B_4_HTA-2_0_.CEL.gz 24.5 Mb (ftp)(http) CEL
GSE84484_RAW.tar 19.5 Mb (http)(custom) TAR (of CHP)
Processed data included within Sample table

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