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Series GSE84339 Query DataSets for GSE84339
Status Public on Dec 01, 2016
Title Whole transcriptome analysis of lung squamouse cell carcinoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Discovery of novel diagnostic and/or prognostic biomarkers of lung squamous cell carcinoma based on a whole transcriptome analysis using RNA sequencing (RNA-seq). Transcriptomic profiles of 12 available samples, out of 87 recruited patients with lung squamous cell carcinoma (SCC) were generated using Ion Proton system.
Overall design Tumoral mRNA profiles of 12 patients with lung SCC were generated by deep sequencing, using Ion Proton system.
Contributor(s) Rokudai S, Otaka Y, Horikoshi I, Yoshiyama S, Kawabata R, Nishiyama M
Citation(s) 28087642
Submission date Jul 13, 2016
Last update date May 15, 2019
Contact name Susumu Rokudai
Phone +81-27-220-7962
Organization name Gunma University Graduate School of Medicine
Department Molecular Pharmacology and Oncology
Street address Showa-machi 3-39-22
City Maebashi
State/province Gunma
ZIP/Postal code 3718511
Country Japan
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (12)
GSM2232091 L050
GSM2232092 L060
GSM2232093 L075
BioProject PRJNA328932
SRA SRP078419

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Supplementary file Size Download File type/resource
GSE84339_genes_fpkm_lung_SCC.txt.gz 949.4 Kb (ftp)(http) TXT
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Processed data are available on Series record

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