GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE84125 Query DataSets for GSE84125
Status Public on May 22, 2017
Title Gene expression profiles in naïve and activated CD4+ T cells from WT and Capicua (Cic)-deficient mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: Next-generation sequencing (NGS) to reveal CIC target genes in CD4 T cells. The goals of this study are to compare NGS-derived CD4 T cell transcriptome in the presence or absence of CIC.
Overall design To identify the genes regulated by CIC in CD4+ T cells, RNA-seq was performed using naive and activated CD4+ T cells in the spleen from Cic f/f and Cic f/f; Cd4-Cre mice.
Contributor(s) Lee Y, Park S
Citation(s) 28855737
BioProject PRJNA324625
Submission date Jul 07, 2016
Last update date May 15, 2019
Contact name Yoontae Lee
Organization name POSTECH
Department Life Science
Street address 77 Cheongam-Ro, Nam-Gu
City Pohang
State/province Gyeongbuk
ZIP/Postal code 37673
Country South Korea
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (4)
GSM2227553 WT-Day-0_1
GSM2227554 WT-Day-3_1
GSM2227555 cKO-Day-0_1
SRA SRP076201

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE84125_DEG.xlsx 11.2 Mb (ftp)(http) XLSX
GSE84125_GO_0vs3.xlsx 421.6 Kb (ftp)(http) XLSX
GSE84125_GO_Total_chart.xlsx 2.2 Mb (ftp)(http) XLSX
GSE84125_GO_WT_0vs3.xlsx 385.1 Kb (ftp)(http) XLSX
GSE84125_GO_cKO_0vs3.xlsx 357.3 Kb (ftp)(http) XLSX
GSE84125_GO_cKOvsWT.xlsx 124.4 Kb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap