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Series GSE83975 Query DataSets for GSE83975
Status Public on Dec 12, 2016
Title Genome-wide Identification of Neuronal Activity-regulated Genes in Drosophila [Elav_TrpA1_ATAC]
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We identified ARGs in a genome-wide manner, in fly brains as well as in sorted neurons; they included dopaminergic neurons (DA) and a subset of circadian-related neurons (PDF+ neurons).
 
Overall design Elav-GAL4;UAS-TrpA1 or Elav-GAL4 flies stimulated with temperature shift and chromatin DNA isolated and sequenced 0 and 30 min after.
 
Contributor(s) Chen X, Rosbash M
Citation(s) 27936378
Submission date Jul 01, 2016
Last update date May 15, 2019
Contact name Xiao Chen
E-mail(s) chxiao@brandeis.edu
Organization name Brandeis University
Department Biology
Lab Rosbash Lab
Street address 415 South St
City Waltham
State/province MA
ZIP/Postal code 02451
Country USA
 
Platforms (1)
GPL16479 Illumina MiSeq (Drosophila melanogaster)
Samples (4)
GSM2224724 Elav-GAL4 0'
GSM2224725 Elav-GAL4 30'
GSM2224726 Elav-TrpA1 0'
This SubSeries is part of SuperSeries:
GSE83976 Genome-wide Identification of Neuronal Activity-regulated Genes in Drosophila
Relations
BioProject PRJNA327587
SRA SRP077743

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83975_RAW.tar 154.5 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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