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| Status |
Public on Jun 14, 2017 |
| Title |
Histone Deacetylase 3 Prepares Brown Adipose Tissue For Acute Thermogenic Challenge |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
Expression profiling by high throughput sequencing
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Citation(s) |
28614293 |
| Submission date |
Jun 30, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Hee-Woong Lim |
| Organization name |
Cincinnati Children's Hospital Medical Center
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| Department |
Division of Biomedical Informatics
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| Street address |
3333 Burnet Ave. MLC 7024
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| City |
Cincinnati |
| State/province |
Ohio |
| ZIP/Postal code |
45229 |
| Country |
USA |
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| Platforms (3) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
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| Samples (21)
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| GSM2221741 |
ChIP-seq, BAT HDAC3, HDAC3 floxed, 29C/5pm |
| GSM2221742 |
ChIP-seq, BAT HDAC3, Adiponectin-Cre HDAC3 floxed, 29C/5pm |
| GSM2221743 |
ChIP-seq, BAT ERRa, HDAC3 floxed, 29C/5pm |
| GSM2221744 |
ChIP-seq, BAT ERRa, Adiponectin-Cre HDAC3 floxed, 29C/5pm |
| GSM2221745 |
ChIP-seq, BAT H3K27ac, HDAC3 floxed, 29C/5pm, replicate 1 |
| GSM2221746 |
ChIP-seq, BAT H3K27ac, HDAC3 floxed, 29C/5pm, replicate 2 |
| GSM2221747 |
ChIP-seq, BAT H3K27ac, Adiponectin-Cre HDAC3 floxed, 29C/5pm, replicate 1 |
| GSM2221748 |
ChIP-seq, BAT H3K27ac, Adiponectin-Cre HDAC3 floxed, 29C/5pm, replicate 2 |
| GSM2221749 |
GRO-seq, BAT HDAC3, HDAC3 floxed, 29C/5pm |
| GSM2221750 |
GRO-seq, BAT HDAC3, Adiponectin-Cre HDAC3 floxed, 29C/5pm |
| GSM2221751 |
GRO-seq, BAT HDAC3, HDAC3 floxed, 22C/5pm |
| GSM2221752 |
GRO-seq, BAT HDAC3, Adiponectin-Cre HDAC3 floxed, 22C/5pm |
| GSM2221753 |
HDAC3ff_5pm_29C_11 |
| GSM2221754 |
HDAC3ff_5pm_29C_12 |
| GSM2221755 |
HDAC3ff_5pm_29C_13 |
| GSM2221756 |
HDAC3ff_5pm_29C_14 |
| GSM2221757 |
AdQCre_HDAC3ff_5pm_29C_20 |
| GSM2221758 |
AdQCre_HDAC3ff_5pm_29C_4 |
| GSM2221759 |
AdQCre_HDAC3ff_5pm_29C_19 |
| GSM2221760 |
AdQCre_HDAC3ff_5pm_29C_5 |
| GSM2407034 |
ChIP-seq, BAT NCoR, 29C/5pm |
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| This SuperSeries is composed of the following SubSeries: |
| GSE83926 |
Histone Deacetylase 3 Prepares Brown Adipose Tissue For Acute Thermogenic Challenge [ChIP-Seq, GRO-Seq] |
| GSE83927 |
Histone Deacetylase 3 Prepares Brown Adipose Tissue For Acute Thermogenic Challenge [RNA-Seq] |
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| Relations |
| BioProject |
PRJNA327418 |
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