|
| Status |
Public on Sep 15, 2016 |
| Title |
Multiple hierarchies of Polycomb targeting to Drosophila genome (Part 3) |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
Polycomb group (PcG) proteins are critical epigenetic regulators of development. Here we compared genomic distribution of Polycomb (Pc) protein in cultured Drosophila cells lacking Su(z)12 protein to that of the wild type.
|
| |
|
| Overall design |
ChIP of Pc protein coupled to next-generation sequencing from wild-type and Su(z)12 - null cultured cells. Done in two replicates, with DNA from corresponding chromatin inputs sequenced as a control.
|
| |
|
| Contributor(s) |
Schwartz YB, Kahn TG |
| Citation(s) |
27557709 |
| |
| Submission date |
Jun 12, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Yuri B Schwartz |
| Organization name |
Umeå University
|
| Street address |
Byggnad 6L, NUS
|
| City |
Umeå |
| ZIP/Postal code |
90187 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL16479 |
Illumina MiSeq (Drosophila melanogaster) |
|
| Samples (8)
|
| GSM2197635 |
Pc_ChIP-seq_in_Su(z)12-minus_cells_replicate1 [part 3] |
| GSM2197636 |
Input-seq_in_Su(z)12-minus_cells_replicate1 [part 3] |
| GSM2197637 |
Pc_ChIP-seq_in_Su(z)12-minus_cells_replicate2 [part 3] |
| GSM2197638 |
Input-seq_in_Su(z)12-minus_cells_replicate2 [part 3] |
| GSM2197639 |
Pc_ChIP-seq_in_wild-type_cells_replicate1 [part 3] |
| GSM2197640 |
Input-seq_in_wild-type_cells_replicate1 [part 3] |
| GSM2197641 |
Pc_ChIP-seq_in_wild-type_cells_replicate2 [part 3] |
| GSM2197642 |
Input-seq_in_wild-type_cells_replicate2 [part 3] |
|
| This SubSeries is part of SuperSeries: |
| GSE83248 |
Interdependence of PRC1 and PRC2 for recruitment to Polycomb Response Elements |
|
| Relations |
| BioProject |
PRJNA325406 |
| SRA |
SRP076439 |
Less...
More...