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Series GSE83247 Query DataSets for GSE83247
Status Public on Sep 15, 2016
Title Multiple hierarchies of Polycomb targeting to Drosophila genome (Part 3)
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Polycomb group (PcG) proteins are critical epigenetic regulators of development. Here we compared genomic distribution of Polycomb (Pc) protein in cultured Drosophila cells lacking Su(z)12 protein to that of the wild type.
Overall design ChIP of Pc protein coupled to next-generation sequencing from wild-type and Su(z)12 - null cultured cells. Done in two replicates, with DNA from corresponding chromatin inputs sequenced as a control.
Contributor(s) Schwartz YB, Kahn TG
Citation(s) 27557709
Submission date Jun 12, 2016
Last update date May 15, 2019
Contact name Yuri B Schwartz
Organization name Umeå University
Street address Byggnad 6L, NUS
City Umeå
ZIP/Postal code 90187
Country Sweden
Platforms (1)
GPL16479 Illumina MiSeq (Drosophila melanogaster)
Samples (8)
GSM2197635 Pc_ChIP-seq_in_Su(z)12-minus_cells_replicate1 [part 3]
GSM2197636 Input-seq_in_Su(z)12-minus_cells_replicate1 [part 3]
GSM2197637 Pc_ChIP-seq_in_Su(z)12-minus_cells_replicate2 [part 3]
This SubSeries is part of SuperSeries:
GSE83248 Interdependence of PRC1 and PRC2 for recruitment to Polycomb Response Elements
BioProject PRJNA325406
SRA SRP076439

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Supplementary file Size Download File type/resource
GSE83247_RAW.tar 624.3 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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