GEO Publications
Handout
NAR 2013 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE81912
Query DataSets for GSE81912
Status
Public on Aug 18, 2017
Title
Fragile X Syndrome causes epigenetic disruptions treatable with BET inhibitor Jq1
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
28823556
NIH grant(s)
Grant ID
Grant title
Affiliation
Name
K99 MH111836
The histone code of neuronal function and dysfunction
THE ROCKEFELLER UNIVERSITY
Erica Megan Korb
Submission date
May 25, 2016
Last update date
Jul 25, 2021
Contact name
Erica Korb
Organization name
University of Pennsylvania
Lab
Korb Lab
Street address
3400 Civic Center Boulevard
City
Philadelphia
State/province
PENNSYLVANIA
ZIP/Postal code
19104
Country
USA
Platforms (2)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (48)
Less...
More...
GSM2175747
WT_dmso_n1
GSM2175748
WT_dmso_n2
GSM2175749
WT_dmso_n3
GSM2175750
KO_dmso_n1
GSM2175751
KO_dmso_n2
GSM2175752
KO_dmso_n3
GSM2175753
WT_Jq1_n1
GSM2175754
WT_Jq1_n2
GSM2175755
WT_Jq1_n3
GSM2175756
KO_Jq1_n1
GSM2175757
KO_Jq1_n2
GSM2175758
KO_Jq1_n3
GSM2175759
WT_THZ_n1
GSM2175760
WT_THZ_n2
GSM2175761
WT_THZ_n3
GSM2175762
KO_THZ_n1
GSM2175763
KO_THZ_n2
GSM2175764
KO_THZ_n3
GSM2177669
H3K4me3_neurons_WT_input fvb
GSM2177670
H3K4me3_neurons_WT_IP fvb
GSM2177671
H3K4me3_neurons_KO_input fvb
GSM2177672
H3K4me3_neurons_KO_IP fvb
GSM2177673
H3K27ac_neurons_WT_input 1
GSM2177674
H3K27ac_neurons_WT_IP 1
GSM2177675
H3K27ac_neurons_KO_input 1
GSM2177676
H3K27ac_neurons_KO_IP 1
GSM2177677
H3K4me3_tissue_WT_input 1
GSM2177678
H3K4me3_tissue_WT_IP 1
GSM2177679
H3K4me3_tissue_WT_input 2
GSM2177680
H3K4me3_tissue_WT_IP 2
GSM2177681
H3K4me3_tissue_WT_input 3
GSM2177682
H3K4me3_tissue_WT_IP 3
GSM2177683
H3K4me3_tissue_KO_input 1
GSM2177684
H3K4me3_tissue_KO_IP 1
GSM2177685
H3K4me3_tissue_KO_input 2
GSM2177686
H3K4me3_tissue_KO_IP 2
GSM2177687
H3K4me3_tissue_KO_input 3
GSM2177688
H3K4me3_tissue_KO_IP 3
GSM2698857
H3K4me3_neuronsWT_input 1 C57B6
GSM2698858
H3K4me3_neuronsWT_IP 1 C57B6
GSM2698859
H3K4me3_neuronsKO_input 1 C57B6
GSM2698860
H3K4me3_neuronsKO_IP 1 C57B6
GSM2698861
H3K4me3_neuronsWT_input 2 C57B6
GSM2698862
H3K4me3_neuronsWT_IP 2 C57B6
GSM2698863
H3K4me3_neuronsKO_input 2 C57B6
GSM2698864
H3K4me3_neuronsKO_IP 2 C57B6
GSM2698865
H3K27ac_neurons_WT_IP 2 FVBN
GSM2698866
H3K27ac_neurons_KO_IP 2 FVBN
This SuperSeries is composed of the following SubSeries:
GSE81803
RNA-sequencing in WT and Fmr1-/- (KO) neurons treated with Jq1 and THZ
GSE81911
ChIP-sequencing of histone marks in WT and Fmr1-/- (KO) neurons and mice
Relations
BioProject
PRJNA323397
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE81912_RAW.tar
7.9 Gb
(http)
(custom)
TAR (of TDF)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...