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GEO accession:
Series GSE81258
Query DataSets for GSE81258
Status
Public on May 10, 2016
Title
Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
27374332
Submission date
May 09, 2016
Last update date
May 15, 2019
Contact name
William Greenleaf
E-mail(s)
wjg@stanford.edu
Organization name
Stanford University
Street address
279 Campus Drive
City
Stanford
State/province
CA
ZIP/Postal code
94305
Country
USA
Platforms (3)
GPL16417
Illumina MiSeq (Mus musculus)
GPL16791
Illumina HiSeq 2500 (Homo sapiens)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
Samples (91)
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More...
GSM2147562
L1-A [ATAC-seq]
GSM2147563
L1-B [ATAC-seq]
GSM2147564
L2-A [ATAC-seq]
GSM2147565
L2-B [ATAC-seq]
GSM2147566
L3-A [ATAC-seq]
GSM2147567
L3-B [ATAC-seq]
GSM2147568
L4-A [ATAC-seq]
GSM2147569
L4-B [ATAC-seq]
GSM2147570
T1 [ATAC-seq]
GSM2147571
T2-A [ATAC-seq]
GSM2147572
T2-B [ATAC-seq]
GSM2147573
T3-A [ATAC-seq]
GSM2147574
T3-B [ATAC-seq]
GSM2147575
T4-A [ATAC-seq]
GSM2147576
T4-B [ATAC-seq]
GSM2147577
16T-A [ATAC-seq]
GSM2147578
16T-B [ATAC-seq]
GSM2147579
25L-A [ATAC-seq]
GSM2147580
25L-B [ATAC-seq]
GSM2147581
2N1-A [ATAC-seq]
GSM2147582
2N1-B [ATAC-seq]
GSM2147583
KP1-A [ATAC-seq]
GSM2147584
KP1-B [ATAC-seq]
GSM2147585
KP22-A [ATAC-seq]
GSM2147586
KP22-B [ATAC-seq]
GSM2147587
MotL-A [ATAC-seq]
GSM2147588
MotL-B [ATAC-seq]
GSM2147589
16T_shLuc_counted_A [ATAC-seq]
GSM2147590
16T_shLuc_counted_B [ATAC-seq]
GSM2147591
16T-shLuc-FACS_A [ATAC-seq]
GSM2147592
16T-shLuc-FACS_B [ATAC-seq]
GSM2147593
16T_sh2_counted_A [ATAC-seq]
GSM2147594
16T_sh2_counted_B [ATAC-seq]
GSM2147595
16T-sh2-FACS_A [ATAC-seq]
GSM2147596
16T-sh2-FACS_B [ATAC-seq]
GSM2147597
KP1-shLuc_counted_A [ATAC-seq]
GSM2147598
KP1-shLuc_counted_B [ATAC-seq]
GSM2147599
KP1-sh2_counted_A [ATAC-seq]
GSM2147600
KP1-sh2_counted_B [ATAC-seq]
GSM2147601
KP1-shLuc-FACS_A [ATAC-seq]
GSM2147602
KP1-shLuc-FACS_B [ATAC-seq]
GSM2147603
KP1-sh2-FACS_A [ATAC-seq]
GSM2147604
KP1-sh2-FACS_B [ATAC-seq]
GSM2147605
KP22-empty-1d_A [ATAC-seq]
GSM2147606
KP22-empty-1d_B [ATAC-seq]
GSM2147607
KP22-empty-2d_A [ATAC-seq]
GSM2147608
KP22-empty-2d_B [ATAC-seq]
GSM2147609
KP22-empty-1w_A [ATAC-seq]
GSM2147610
KP22-empty-1w_B [ATAC-seq]
GSM2147611
KP22-empty-2w_A [ATAC-seq]
GSM2147612
KP22-empty-2w_B [ATAC-seq]
GSM2147613
KP22-nfib-1d_A [ATAC-seq]
GSM2147614
KP22-nfib-1d_B [ATAC-seq]
GSM2147615
KP22-nfib-2d_A [ATAC-seq]
GSM2147616
KP22-nfib-2d_B [ATAC-seq]
GSM2147617
KP22-nfib-1w_A [ATAC-seq]
GSM2147618
KP22-nfib-1w_B [ATAC-seq]
GSM2147619
KP22-nfib-2w_A [ATAC-seq]
GSM2147620
KP22-nfib-2w_B [ATAC-seq]
GSM2147621
NJH29_empty_A [ATAC-seq]
GSM2147622
NJH29_nfib_A [ATAC-seq]
GSM2147623
NCI-H524_empty_A [ATAC-seq]
GSM2147624
NCI-H524_empty_B [ATAC-seq]
GSM2147625
NCI-H524_empty_C [ATAC-seq]
GSM2147626
NCI-H524_nfib_A [ATAC-seq]
GSM2147627
NCI-H524_nfib_B [ATAC-seq]
GSM2147628
NCI-H524_nfib_C [ATAC-seq]
GSM2147629
16T_input1 [ChIP-seq]
GSM2147630
16T_input2 [ChIP-seq]
GSM2147631
16T_PD1 [ChIP-seq]
GSM2147632
16T_PD2 [ChIP-seq]
GSM2147633
KP1_input1 [ChIP-seq]
GSM2147634
KP1_input2 [ChIP-seq]
GSM2147635
KP1-PD1 [ChIP-seq]
GSM2147636
KP1-PD2 [ChIP-seq]
GSM2147637
KP22_input1 [ChIP-seq]
GSM2147638
KP22_input2 [ChIP-seq]
GSM2147639
KP22_PD1 [ChIP-seq]
GSM2147640
KP22_PD2 [ChIP-seq]
GSM2147641
16T-shLuc_1 [RNA-seq]
GSM2147642
16T-shLuc_2 [RNA-seq]
GSM2147643
16T-sh2_1 [RNA-seq]
GSM2147644
16T-sh2_2 [RNA-seq]
GSM2147645
KP1-shLuc_1 [RNA-seq]
GSM2147646
KP1-shLuc_2 [RNA-seq]
GSM2147647
KP1-sh2_1 [RNA-seq]
GSM2147648
KP1-sh2_2 [RNA-seq]
GSM2147649
KP22-empty_1 [RNA-seq]
GSM2147650
KP22-empty_2 [RNA-seq]
GSM2147651
KP22-nfib_1 [RNA-seq]
GSM2147652
KP22-nfib_2 [RNA-seq]
This SuperSeries is composed of the following SubSeries:
GSE81255
Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ATAC-seq]
GSE81256
Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [ChIP-seq]
GSE81257
Nfib promotes Metastasis through a Widespread Increase in Chromatin Accessibility [RNA-seq]
Relations
BioProject
PRJNA321069
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Format
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Supplementary data files not provided
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