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Series GSE80306 Query DataSets for GSE80306
Status Public on Apr 15, 2016
Title Aging-related virtually naïve memory T (TVNM) cells: a new stage in T cell response to persistent infections in humans
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We conducted RNA-Seq on T cell subsets sorted from five donors to identify a transcriptional signature associated with virtually naïve memory T cells.
Overall design We sorted various T cell subsets from five donors including TEMRAs, naïve T cells, effector memory T cells, central memory T cells, and virtually naïve memory T cells and used a template-switching-based library construction protocol to faciliate low-input RNA-Seq from tens to hundreds of thousands of cells in each subpopulation.
Contributor(s) Sims PA
Citation(s) 27270402
Submission date Apr 14, 2016
Last update date May 15, 2019
Contact name Peter A Sims
Organization name Columbia University
Street address 3960 Broadway, Lasker 203AC
City New York
State/province NY
ZIP/Postal code 10032
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (21)
GSM2124044 HS60223_TEMRA
GSM2124045 LH097_TEMRA
GSM2124046 LH083_TEMRA
BioProject PRJNA318527
SRA SRP073331

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Supplementary file Size Download File type/resource
GSE80306_RNAseq_counts.txt.gz 919.6 Kb (ftp)(http) TXT
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Processed data are available on Series record

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