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Series GSE79860 Query DataSets for GSE79860
Status Public on Jan 01, 2017
Title A switch from neuronal network development to maintenance during postnatal development of rat prefrontal cortex
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary To unravel the gene expression changes during postnatal prefrontal cortex development, RNA-seq was performed in the rat medial prefrontal cortex at five time points from early life to adulthood (postnatal day 8, 14, 21, 35 and 70) and differential expression of protein-coding genes, lincRNAs and alternative exons was analyzed. A switch from neuronal network development to maintenance during postnatal rat prefrontal cortex development was shown.
Overall design Comparison of gene expression between 5 different developmental time points (postnatal day 8, 14, 21, 35 and 70) in medial prefrontal cortex of Wistar rats. 5 samples per time point.
Contributor(s) Huiqing Zhou J
Citation(s) 28108491
Submission date Apr 03, 2016
Last update date Jun 14, 2022
Contact name Jo Huiqing Zhou
Organization name Radboud University
Street address Geert Grooteplein 26/28
City Nijmegen
ZIP/Postal code 6525GA
Country Netherlands
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (25)
GSM2107375 PFC_WT8_25_2
GSM2107376 PFC_WT8_25_3
GSM2107377 PFC_WT8_26_1
BioProject PRJNA317345
SRA SRP072843

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79860_RAW.tar 3.3 Gb (http)(custom) TAR (of BEDGRAPH)
GSE79860_rat_WT_PFC_FPKM_table.txt.gz 1.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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