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GEO accession:
Series GSE79819
Query DataSets for GSE79819
Status
Public on Jul 13, 2016
Title
Microglia development follows a stepwise program to regulate brain homeostasis
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
27338705
Submission date
Apr 01, 2016
Last update date
May 15, 2019
Contact name
Ido Amit
E-mail(s)
ido.amit@weizmann.ac.il
Phone
972-8-9343338
Organization name
Weizmann Institute of Science
Department
Immunology
Street address
234 Herzl st.
City
Rehovot
ZIP/Postal code
760001
Country
Israel
Platforms (1)
GPL19057
Illumina NextSeq 500 (Mus musculus)
Samples (117)
Less...
More...
GSM2104025
brain_E12.5 (Sample 1)
GSM2104026
brain_E12.5 (Sample 2)
GSM2104027
brain_E10.5 (Sample 3)
GSM2104028
brain_E10.5 (Sample 4)
GSM2104029
Spinal_cord_adult_8wk (Sample 5)
GSM2104030
Spinal_cord_adult_8wk (Sample 6)
GSM2104031
yolk_E12.5 (Sample 7)
GSM2104032
yolk_E12.5 (Sample 8)
GSM2104033
cortex_adult_8wk (Sample 9)
GSM2104034
cortex_adult_8wk (Sample 10)
GSM2104035
Hippocampus_adult_8wk (Sample 11)
GSM2104036
Hippocampus_adult_8wk (Sample 12)
GSM2104037
brain_E13.5 (Sample 13)
GSM2104038
brain_E14.5 (Sample 14)
GSM2104039
brain_E16.5 (Sample 15)
GSM2104040
brain_E16.5 (Sample 16)
GSM2104041
brain_day3 (Sample 17)
GSM2104042
brain_day3 (Sample 18)
GSM2104043
brain_day6 (Sample 19)
GSM2104044
brain_day6 (Sample 20)
GSM2104045
brain_day9 (Sample 21)
GSM2104046
brain_day9 (Sample 22)
GSM2104047
yolk_E10.5 (Sample 23)
GSM2104048
yolk_E10.5 (Sample 24)
GSM2104049
yolk_E11.5 (Sample 25)
GSM2104050
yolk_E11.5 (Sample 26)
GSM2104051
yolk_E13.5 (Sample 27)
GSM2104052
yolk_E13.5 (Sample 28)
GSM2104053
E.14.5_PBS_injected_newborn (Sample 29)
GSM2104054
E.14.5_PBS_injected_newborn (Sample 30)
GSM2104055
E.14.5_Poly.IC_injected_newborn (Sample 31)
GSM2104056
E.14.5_Poly.IC_injected_newborn (Sample 32)
GSM2104057
E.14.5_PBS_injected_4wk (Sample 33)
GSM2104058
E.14.5_PBS_injected_4wk (Sample 34)
GSM2104059
E.12.5_Poly.IC_injected_newborn (Sample 35)
GSM2104060
E.12.5_Poly.IC_injected_newborn (Sample 36)
GSM2104061
E.12.5_Poly.IC_injected_newborn (Sample 37)
GSM2104062
E.12.5_Poly.IC_injected_newborn (Sample 38)
GSM2104063
E.12.5_Poly.IC_injected_newborn (Sample 39)
GSM2104064
E.14.5_Poly.IC_injected_4wk (Sample 40)
GSM2104065
E.14.5_Poly.IC_injected_4wk (Sample 41)
GSM2104066
E.14.5_Poly.IC_injected_4wk (Sample 42)
GSM2104067
E.14.5_Poly.IC_injected_4wk (Sample 43)
GSM2104068
E.14.5_Poly.IC_injected_4wk (Sample 44)
GSM2104069
E.14.5_Poly.IC_injected_4wk (Sample 45)
GSM2104070
E.14.5_Poly.IC_injected_4wk (Sample 46)
GSM2104071
E.14.5_Poly.IC_injected_4wk (Sample 47)
GSM2104072
E.14.5_Poly.IC_injected_4wk (Sample 48)
GSM2104073
E.14.5_Poly.IC_injected_4wk (Sample 49)
GSM2104074
E.14.5_Poly.IC_injected_4wk (Sample 50)
GSM2104075
E.14.5_Poly.IC_injected_4wk (Sample 51)
GSM2104076
Brain_GFctrl_6wk (Sample 52)
GSM2104077
Brain_GFctrl_6wk (Sample 53)
GSM2104078
Brain_GFctrl_6wk (Sample 54)
GSM2104079
Brain_GFctrl_6wk (Sample 55)
GSM2104080
Brain_GF_6wk (Sample 56)
GSM2104081
Brain_GF_6wk (Sample 57)
GSM2104082
Brain_GF_6wk (Sample 58)
GSM2104083
Brain_GF_6wk (Sample 59)
GSM2104084
Brain_GF_6wk (Sample 60)
GSM2104085
Brain_GF_4wk (Sample 61)
GSM2104086
Brain_GF_4wk (Sample 62)
GSM2104087
Brain_GF_8wk (Sample 63)
GSM2104088
Brain_GF_8wk (Sample 64)
GSM2104089
Brain_GF_Newborn (Sample 65)
GSM2104090
Brain_GF_Newborn (Sample 66)
GSM2104091
Brain_GF_Newborn (Sample 67)
GSM2104092
Brain_GFctrl_Newborn (Sample 68)
GSM2104093
Brain_GFctrl_Newborn (Sample 69)
GSM2104094
Brain_GFctrl_Newborn (Sample 70)
GSM2104095
Brain_GFctrl_4wk (Sample 71)
GSM2104096
Brain_GFctrl_4wk (Sample 72)
GSM2104097
Brain_GFctrl_8wk (Sample 73)
GSM2104098
Brain_GFctrl_8wk (Sample 74)
GSM2104099
Mafb_KO_5wk (Sample 75)
GSM2104100
Mafb_KO_5wk (Sample 76)
GSM2104101
Mafb_KO_5wk (Sample 77)
GSM2104102
Mafb_ctrl_5wk (Sample 78)
GSM2104103
Mafb_ctrl_5wk (Sample 79)
GSM2104104
Mafb_ctrl_5wk (Sample 80)
GSM2104105
Mafb_KO_Newborn (Sample 81)
GSM2104106
Mafb_KO_Newborn (Sample 82)
GSM2104107
Mafb_ctrl_Newborn (Sample 83)
GSM2104108
Mafb_KO_Newborn (Sample 84)
GSM2104109
Mafb_KO_Newborn (Sample 85)
GSM2104110
Mafb_ctrl_Newborn (Sample 86)
GSM2104111
Mafb_KO_Newborn (Sample 87)
GSM2104112
Mafb_ctrl_Newborn (Sample 88)
GSM2104113
Mafb_KO_Newborn (Sample 89)
GSM2104282
Adult microglia k4me2
GSM2104283
E12.5 microglia k4me2
GSM2104284
Pre-microglia k4me2
GSM2104285
E12.5 YS progenitors k4me2
GSM2104286
Adult microglia ATAC
GSM2104287
Pre-microglia ATAC
GSM2104288
E12.5 microglia ATAC
GSM2104289
E12.5 YS progenitors ATAC
GSM2104296
AB335 (Sample 1)
GSM2104297
AB336 (Sample 2)
GSM2104298
AB397 (Sample 3)
GSM2104299
AB398 (Sample 4)
GSM2104300
AB399 (Sample 5)
GSM2104301
AB400 (Sample 6)
GSM2104302
AB434 (Sample 7)
GSM2104303
AB435 (Sample 8)
GSM2104304
AB436 (Sample 9)
GSM2104305
AB437 (Sample 10)
GSM2104306
AB438 (Sample 11)
GSM2104307
AB439 (Sample 12)
GSM2104308
AB440 (Sample 13)
GSM2104309
AB441 (Sample 14)
GSM2104310
AB442 (Sample 15)
GSM2104311
AB443 (Sample 16)
GSM2104312
AB444 (Sample 17)
GSM2104313
AB445 (Sample 18)
GSM2107767
brain_E11.5 (Sample 90)
GSM2107768
brain_E11.5 (Sample 91)
This SuperSeries is composed of the following SubSeries:
GSE79812
Microglia development follows a stepwise program to regulate brain homeostasis - RNA seq
GSE79816
Microglia development follows a stepwise program to regulate brain homeostasis - ChIP-seq
GSE79818
Microglia development follows a stepwise program to regulate brain homeostasis - Single Cell RNA-seq
Relations
BioProject
PRJNA317057
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE79819_RAW.tar
1.9 Gb
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TAR (of BIGWIG)
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