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Status |
Public on Nov 15, 2016 |
Title |
DNA methylation is required for chromatin binding by Mbd2 and Mbd3 in ES cells |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing
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Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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Citation(s) |
27849519 |
NIH grant(s) |
Grant ID |
Grant title |
Affiliation |
Name |
R01 HD072122 |
Roles of Chromatin Regulation in Embryonic Stem Cell Self-Renewal |
UNIV OF MASSACHUSETTS MED SCHOOL |
THOMAS G. FAZZIO |
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|
Submission date |
Mar 31, 2016 |
Last update date |
May 15, 2019 |
Contact name |
Sarah J Hainer |
E-mail(s) |
sarah.hainer@pitt.edu
|
Organization name |
University of Pittsburgh
|
Department |
Department of Biological Sciecnes
|
Lab |
Hainer Lab
|
Street address |
4249 Fifth Ave
|
City |
Pittsburgh |
State/province |
PA |
ZIP/Postal code |
15260 |
Country |
USA |
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Platforms (2) |
GPL10333 |
Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Feature Number version) |
GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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Samples (78)
|
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This SuperSeries is composed of the following SubSeries: |
GSE79769 |
DNA methylation is required for chromatin binding by Mbd2 and Mbd3 in ES cells (mRNA) |
GSE79770 |
DNA methylation is required for chromatin binding by Mbd2 and Mbd3 in ES cells (ChIP-Seq, meDIP-seq and hmDIP-seq) |
GSE86965 |
DNA methylation is required for chromatin binding by Mbd2 and Mbd3 in ES cells (ChIP-Seq) |
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Relations |
BioProject |
PRJNA316975 |