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Series GSE79133 Query DataSets for GSE79133
Status Public on Dec 19, 2016
Title HEK293 cells 100 cell RNAseq profiling on Illumina NextSeq 500
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Three libraries from 100 HEK293 cells each were prepared using a Smartseq based custom library preparation approach with unique molecular identifiers. Libraries were sequenced on a Illumina NextSeq 500
Overall design HEK293 cell (100 cells) 5' selective RNAseq profiling, N4H4 unique molecular identifiers, 3 replicates
Contributor(s) Arguel MJ, Lebrigand K, Paquet A, Barbry P, Waldmann R
Citation(s) 27940562
Submission date Mar 11, 2016
Last update date May 15, 2019
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (3)
GSM2086454 HEK bulk rep1
GSM2086455 HEK bulk rep2
GSM2086456 HEK bulk rep3
This SubSeries is part of SuperSeries:
GSE79136 A cost effective single cell RNA sequencing approach for the Fluidigm C1
BioProject PRJNA315000
SRA SRP071672

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79133_NS20160217_dge_ed1.txt.gz 107.2 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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