GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE79130 Query DataSets for GSE79130
Status Public on Dec 19, 2016
Title Transcriptome profiling of single HEK293 cells with UMIs sequenced on Ion Torrent Proton (Run 20151215)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary 5' selective RNA-seq of 47 Single HEK293 cells RNAseq profiling with N4H4 unique molecular identifiers processed on a Fluidigm C1.
Overall design Single cell HEK293 cell 5' selective RNAseq profiling, 47 cells, unique molecular identifiers, custom library preparation.
Contributor(s) Arguel MJ, Lebrigand K, Paquet A, Barbry P, Waldmann R
Citation(s) 27940562
Submission date Mar 11, 2016
Last update date May 15, 2019
Contact name Kevin Lebrigand
Organization name IPMC/CNRS
Lab Functional Genomics Platform of Nice-Sophia-Antipolis, France.
Street address 660 route des lucioles
City Valbonne - Sophia-Antipolis
ZIP/Postal code 06560
Country France
Platforms (1)
GPL17303 Ion Torrent Proton (Homo sapiens)
Samples (47)
GSM2086401 PRO20151215_C1_2
GSM2086402 PRO20151215_C1_3
GSM2086403 PRO20151215_C1_5
This SubSeries is part of SuperSeries:
GSE79136 A cost effective single cell RNA sequencing approach for the Fluidigm C1
BioProject PRJNA314998
SRA SRP071670

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE79130_PRO20151215_C1_dge_ed1_47cells.txt.gz 387.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap