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Series GSE78516 Query DataSets for GSE78516
Status Public on Feb 25, 2017
Title Changes in the erythroblast miRNA profile in the bone marrow of a Plasmodium vivax-infected patient
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Human studies of Plasmodium vivax in the bone marrow are scarce. Here, we present a detailed characterization of bone marrow aspirates taken from a P. vivax patient with high parasitaemia on admission and 42 days after treatment. Analysis of miRNAs related to erythropoiesis revealed a distinct series of differentially expressed miRNAs during infection compared to at convalescence. These results suggest that parasites in the bone marrow affect erythropoiesis.
 
Overall design Characterization of bone marrow aspirates taken from a P. vivax patient with high parasitaemia on admission and 42 days after treatment
 
Contributor(s) Raiol T, de Lacerda MV, del Portillo HA
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Submission date Feb 25, 2016
Last update date May 15, 2019
Contact name Taina Raiol
E-mail(s) taina.raiol@fiocruz.br
Organization name Oswaldo Cruz Foundation - Fiocruz
Department Fiocruz Brasília (GEREB)
Street address Av. L3 Norte, Campus Universitário Darcy Ribeiro
City Brasília
State/province DF
ZIP/Postal code 70.904-130
Country Brazil
 
Platforms (1)
GPL15520 Illumina MiSeq (Homo sapiens)
Samples (2)
GSM2071921 D0 ncRNA-Seq
GSM2071922 D42 ncRNA-Seq
Relations
BioProject PRJNA313197
SRA SRP070834

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE78516_Hsapiens_analysis.txt.gz 37.3 Kb (ftp)(http) TXT
GSE78516_miRBase_analysis.txt.gz 7.2 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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