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GEO help: Mouse over screen elements for information. |
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Status |
Public on Feb 02, 2019 |
Title |
Searching for target genes of miR-508/509/506/514 in HCT116 cells |
Organism |
Homo sapiens |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
To elucidate whether miR-508/508/509/514 plays a role in colorectal cancer tumorigenesis, RNA-seq analysis was performed to compare the gene expression profiles of miR-508/508/509/514 mimics and control microRNA transfectants.
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Overall design |
RNA-seq was performed in HCT116 colorectal cancer cells after miR-508/508/509/514 mimics and control microRNA virus infection
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Contributor(s) |
Chen H, Hong J |
Citation missing |
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Submission date |
Feb 02, 2016 |
Last update date |
May 15, 2019 |
Contact name |
Haoyan Chen |
Organization name |
Renji Hospital
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Street address |
145 Shandong Road
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City |
Shanghai |
State/province |
Shanghai |
ZIP/Postal code |
200001 |
Country |
China |
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Platforms (1) |
GPL21290 |
Illumina HiSeq 3000 (Homo sapiens) |
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Samples (14)
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GSM2052436 |
Control micoRNA1, 1 |
GSM2052437 |
Control micoRNA1, 2 |
GSM2052438 |
Control micoRNA1, 3 |
GSM2052439 |
miR-508/508/509/514 mimics mixure, 1 |
GSM2052440 |
miR-508/508/509/514 mimics mixure, 2 |
GSM2052441 |
miR-508/508/509/514 mimics mixure, 3 |
GSM2052442 |
miR-508/508/509/514 mimics mixure, 4 |
GSM2052443 |
Control micoRNA2, 1 |
GSM2052444 |
Control micoRNA2, 2 |
GSM2052445 |
Control micoRNA2, 3 |
GSM2052446 |
Control micoRNA2, 4 |
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Relations |
BioProject |
PRJNA310425 |
SRA |
SRP069180 |
Supplementary file |
Size |
Download |
File type/resource |
GSE77462_HCT116_microRNA_mixure_genes.fpkm_tracking.gz |
2.1 Mb |
(ftp)(http) |
FPKM_TRACKING |
GSE77462_miR-508_genes.fpkm_tracking.gz |
2.0 Mb |
(ftp)(http) |
FPKM_TRACKING |
SRA Run Selector |
Processed data are available on Series record |
Raw data are available in SRA |
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