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Series GSE76450 Query DataSets for GSE76450
Status Public on Jan 01, 2016
Title The differentially expressed genes of A. ferrooxidans ATCC 23270 at different time after introduced fluoride
Platform organism Acidithiobacillus ferrooxidans
Sample organism Acidithiobacillus ferrooxidans ATCC 23270
Experiment type Expression profiling by array
Summary The deleterious fluoride ions, which released from fluoride in uranium during its bioleaching, strongly influenced microbial growth, energy intake, enzyme activity and relative metabolism. Whole-genome microarrays were used to obtain a comprehensive description of the molecular response by A. ferrooxidans ATCC 23270 at 4.8 mM fluoride stress.
 
Overall design The experimental group was introduced 4mM fluoride at the mid-log phase. RNA from control samples were compared to the experimental samples taken at 10, 30, 60, 120 and 240 min after fluoride added. It was used to analyze the genome-wide expression profiling at different time after fluoride was introduced.
 
Contributor(s) Li Q, Ma L
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Submission date Dec 31, 2015
Last update date Jan 03, 2016
Contact name Liyuan Ma
E-mail(s) maliyuan@csu.edu.cn
Organization name Central South University
Street address 932 S. Lushan Rd.
City Changsha
ZIP/Postal code 410083
Country China
 
Platforms (1)
GPL21284 CSU A. ferrooxidans ATCC 23270 10k v1.0
Samples (5)
GSM2024817 10 min after fluoride introduced
GSM2024818 30 min after fluoride introduced
GSM2024819 60 min after fluoride introduced
Relations
BioProject PRJNA307341

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE76450_RAW.tar 7.5 Mb (http)(custom) TAR (of GPR, XLS)
Processed data included within Sample table

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