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Series GSE76116 Query DataSets for GSE76116
Status Public on Dec 21, 2015
Title ChIP-seq analysis of MBD3 in human breast cancer cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Chromatin immunoprecipitation followed by massively parallel sequencing (ChIP-seq) is a powerful approach to identify the genome-wide localization of protein of interest. However, to perform ChIP-seq experiments for large protein complex, such as Mi-2/NuRD complex, is still challenging. Here, we present high-quality MBD3 ChIP-seq data in human breast cancer cells, MDA-MB-231.
Overall design MBD3 ChIP-seq experiment was perform using human breast cancer cells, MDA-MB-231. Two bilogical replicates were prepared.
Contributor(s) Shimbo T, Takaku M, Wade PA
Citation(s) 26981404
Submission date Dec 17, 2015
Last update date May 15, 2019
Contact name Takashi Shimbo
Organization name NIH/NIEHS
Street address 111 TW Alexander Dr.
City RTP
ZIP/Postal code 27709
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (2)
GSM1974448 MBD3_rep1
GSM1974449 MBD3_rep2
BioProject PRJNA306261
SRA SRP067510

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Supplementary file Size Download File type/resource
GSE76116_RAW.tar 559.1 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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