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Series GSE75209 Query DataSets for GSE75209
Status Public on May 06, 2016
Title Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing [halofuginone]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Bone marrow derived macrophages treated with small molecules and stimulated with LPS
 
Overall design Wild-type BMDMs pretreated with small molecules for 30 minutes prior to stimulation with LPS
 
Contributor(s) O'Connell D, Kolde R
Citation(s) 27211859
Submission date Nov 19, 2015
Last update date May 15, 2019
Contact name Raivo Kolde
E-mail(s) rkolde@mgh.harvard.edu
Organization name Massachusetts General Hospital
Department Center for Computational and Integrative Biology
Street address 185 Cambridge St.
City Boston
State/province MASSACHUSETTS
ZIP/Postal code 02114
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (120)
GSM1945143 T0.10000nM_Halofuginone_1
GSM1945144 T0.10000nM_Halofuginone_2mM_Proline_1
GSM1945145 T0.10000nM_Halofuginone_2
This SubSeries is part of SuperSeries:
GSE75212 Simultaneous pathway activity inference and global gene expression analysis using RNA-sequencing
Relations
BioProject PRJNA302808
SRA SRP066443

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE75209_halofuginone_exp.csv.gz 651.3 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
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