GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE74733 Query DataSets for GSE74733
Status Public on Aug 21, 2018
Title H3K27me3 marked genes in primary hippocampal neurons
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq in wildtype and Tspyl2 loss-of-function hippocampal neurons to define H3K27me3 marked genomic regions
Overall design Hippocampal primary neurons were collected from wildtype and Tspyl2 loss-of-function embryos at E16.5 and cultured in Neurobasal Medium with 1 % FBS and B27 supplement for 14 days. Two samples of each genotype were used. SRA Study accession is SRP065154 and BioProject accession is PRJNA299542.
Contributor(s) Liu H, Chan SY
Citation(s) 30051352
BioProject PRJNA299542
Submission date Nov 05, 2015
Last update date May 15, 2019
Contact name Siu Yuen Chan
Organization name University of Hong Kong
Department Paediatrics & Adolescent Medicine
Street address 21 Sassoon Road
City Hong Kong
ZIP/Postal code HK
Country Hong Kong
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL18480 Illumina HiSeq 1500 (Mus musculus)
Samples (16)
GSM1931319 KO1_H3K27me3_PE
GSM1931320 KO1_H3K27me3_SE
GSM1931321 WT1-H3K27me3_SE
SRA SRP065154

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE74733_ko1chip_VS_koinput_nomodel_SPMR_treat_pileup.wig.gz 214.8 Mb (ftp)(http) WIG
GSE74733_ko2chip_VS_koinput_nomodel_SPMR_treat_pileup.wig.gz 209.6 Mb (ftp)(http) WIG
GSE74733_koinput_nomodel_SPMR_control_lambda.wig.gz 275.2 Mb (ftp)(http) WIG
GSE74733_wt1chip_VS_wtinput_nomodel_SPMR_treat_pileup.wig.gz 194.8 Mb (ftp)(http) WIG
GSE74733_wt2chip_VS_wtinput_nomodel_SPMR_treat_pileup.wig.gz 183.6 Mb (ftp)(http) WIG
GSE74733_wtinput_nomodel_SPMR_control_lambda.wig.gz 243.0 Mb (ftp)(http) WIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap