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Series GSE73692 Query DataSets for GSE73692
Status Public on Jul 24, 2017
Title Genome-wide mapping of PRDM15 binding in pluripotent mouse Embryonic Stem Cells (mESCs)
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome-wide mapping of PRDM15 binding in pluripotent mouse Embryonic Stem Cells (mESCs)
Overall design Examination of PRDM15 binding targets in WT vs. Prdm15 KO mESCs in SL or 2i conditions
Contributor(s) Mzoughi S, Wollmann H, Zhang J
Citation(s) 28740264
Submission date Oct 02, 2015
Last update date Jul 25, 2021
Contact name Jingxian Zhang
Organization name Institute of Molecular and Cell Biology (IMCB), A-Star, Singapore
Department IMCB
Street address 61 Biopolis Drive Proteos
City Singapore
State/province Singpaore
ZIP/Postal code 138673
Country Singapore
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (11)
GSM1900988 ChIP-Seq Input of PRDM15 in WT Serum+lif mES cells
GSM1900990 ChIP-Seq analysis of PRDM15 in WT Serum+lif mES cells
GSM2587040 ChIP-Seq Input of PRDM15 in 2i mES cells
This SubSeries is part of SuperSeries:
GSE73694 PRDM15 safeguards naïve pluripotency by transcriptionally regulating WNT and MAPK/ERK signaling
BioProject PRJNA297676
SRA SRP064416

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73692_ES_2i_Prdm15KO_peaks.bed.gz 3.5 Kb (ftp)(http) BED
GSE73692_ES_2i_Prdm15_peaks.bed.gz 83.2 Kb (ftp)(http) BED
GSE73692_ES_Prdm15KO_peaks.bed.gz 1.6 Kb (ftp)(http) BED
GSE73692_RAW.tar 1.3 Gb (http)(custom) TAR (of BW, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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