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Series GSE73319 Query DataSets for GSE73319
Status Public on Jan 26, 2016
Title CCAT1 is a cMYC super-enhancer templated RNA that predicts BET sensitivity in cancer
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq for Brd4 and H3K27ac in a panel of CIMP(+) and CIMP(-) colon cancer cell lines
Overall design Examination of Brd4 binding patterns and H3K27ac patterns to identify super-enhancers
Contributor(s) Firestein R, McCleland M, Blaschke K
Citation(s) 26752646
Submission date Sep 22, 2015
Last update date May 15, 2019
Contact name Florian Gnad
Organization name Genentech
Street address 1 DNA Way
City South San Francisco
ZIP/Postal code 94080
Country USA
Platforms (2)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (30)
GSM1890730 HCT116_H3K27ac
GSM1890731 HCT116_Input_H3K27ac
GSM1890732 HCT116_Brd4
BioProject PRJNA296595
SRA SRP063986

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE73319_RAW.tar 3.7 Gb (http)(custom) TAR (of BEDGRAPH, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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