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Series GSE72750 Query DataSets for GSE72750
Status Public on Sep 08, 2015
Title The methylome of Alu repeats in colon cancer (CGH)
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary Next Generation Sequencing of Unmethylated Alu (NSUMA) interrogation of more than 130,000 individual Alus for differential methylation with concomitant analysis of copy number variations applied to the study of hypomethylation in colorectal cancer.
 
Overall design normal colon tissues, matched primary tumors, and colon derived cell lines
 
Contributor(s) Jordà M, Díez-Villanueva A, Martín B, Lois S, Mallona I, Peinado MA
Citation(s) 27999094
Submission date Sep 04, 2015
Last update date Mar 21, 2017
Contact name Miguel A. Peinado
E-mail(s) mpeinado@igtp.cat
Organization name IGTP
Street address Can Ruti Campus
City Badalona
ZIP/Postal code 08916
Country Spain
 
Platforms (1)
GPL9777 Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version)
Samples (5)
GSM1869447 369
GSM1869448 544
GSM1869449 557
This SubSeries is part of SuperSeries:
GSE72751 The methylome of Alu repeats in colon cancer
Relations
BioProject PRJNA294810

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE72750_RAW.tar 584.4 Mb (http)(custom) TAR (of TXT)
GSE72750_nsuma_cgh.txt.gz 54.5 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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