|
| Status |
Public on Nov 01, 2016 |
| Title |
MethlyC-Seq of Col-0 (wild type, WT), nrpd1-3, nrpe1-11, ros1-4 single mutants and ros1-4nrpd1-3 double mutant |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Methylation profiling by high throughput sequencing
|
| Summary |
Using MethylC-Seq to provide single-base resolution of DNA methylation status in WT, nrpd1-3, nrpe1-11, ros1-4 single mutants and ros1-4nrpd1-3 double mutant
|
| |
|
| Overall design |
MethylC-Seq: 1 WT and 4 mutants examined (nrpd1-3, nrpe1-11, ros1-4 single mutants and ros1-4nrpd1-3 double mutant)
|
| |
|
| Contributor(s) |
Tang K, Zhu J |
| Citation(s) |
27797352 |
| |
| Submission date |
Aug 22, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
Jian-Kang Zhu |
| E-mail(s) |
zhu132@purdue.edu
|
| Organization name |
Purdue University
|
| Department |
Department of Horticulture and Landscape Architecture
|
| Street address |
625 Agriculture Mall Dr.
|
| City |
West Lafayette |
| State/province |
IN |
| ZIP/Postal code |
47907 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
|
| Samples (5)
|
|
| This SubSeries is part of SuperSeries: |
| GSE83802 |
The DNA demethylase ROS1 targets genomic regions with distinct chromatin modifications |
|
| Relations |
| BioProject |
PRJNA293619 |
| SRA |
SRP062740 |
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