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Series GSE71885 Query DataSets for GSE71885
Status Public on Jun 12, 2017
Title ChIP-seq verifiy KDM3B recruitment on Wnt target gene promoters
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Histone demethylase Epigenetically Controls Wnt target Transcription
 
Overall design Identification of genome-wide binding sites of KDM3B, and examination of H3K9me2 upon KDM3A and KDM3B depletion in HCT116 cells
 
Contributor(s) Li J, Yu B, Deng P, Yu Y, Wang C
Citation(s) 28440295
Submission date Aug 10, 2015
Last update date May 15, 2019
Contact name Cunyu Wang
E-mail(s) cwang@dentistry.ucla.edu
Phone 3108256317
Organization name UCLA
Department School of Dentistry
Lab CHS 56-200
Street address 10833 Le Conte Ave
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM1847176 Input_Con
GSM1847177 Input_KD
GSM1847178 KDM3B_Con
Relations
BioProject PRJNA292401
SRA SRP062218

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71885_RAW.tar 270.8 Mb (http)(custom) TAR (of BED, WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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