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Series GSE71341 Query DataSets for GSE71341
Status Public on Feb 10, 2017
Title The repressive regulatory role of H3K27me3 histone mark in bovine mastitis resistance to Staphylococcus aureus
Organism Bos taurus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The regulatory effects of H3K27me3 on target genes expressions were analyzed by comparing S. aureus mastitis resistant and susceptible cows. The differentially expressed genes are mainly associated with immune and disease-related processes, which were negatively regulated by H3K27me3 modification on the up 2Kb regions relative to TSS in S. aureus mastitis cattle.
Overall design Examination of H3K27me3 modifications in six cows.
Contributor(s) He Y, Song M, Zhang Y, Li X, Song J, Zhang Y, Yu Y
Citation(s) 27503467
Submission date Jul 24, 2015
Last update date May 15, 2019
Contact name Yanghua He
Organization name University of Hawaii at Manoa
Department Human Nutrition, Food and Animal Sciences
Lab AgSci building, Room 314I
Street address 1955 East West Road
City Honolulu
State/province HI
ZIP/Postal code 96822
Country USA
Platforms (1)
GPL15749 Illumina HiSeq 2000 (Bos taurus)
Samples (6)
GSM1832788 B105213
GSM1832789 B106117
GSM1832790 B108074
BioProject PRJNA290927
SRA SRP061573

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE71341_RAW.tar 350.3 Mb (http)(custom) TAR (of TAR)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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