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Series GSE70785 Query DataSets for GSE70785
Status Public on Feb 29, 2016
Title Differentially Expressed Pseudogenes in HIV-1 Infection
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We analyzed transcriptomic data from infected and uninfected T-cells to identify pseudogenes and their parent genes showing differential expression in HIV-1 infection
Overall design H9 T-cell line was infected with NL4-3 strain of HIV-1 obtained by transfection of 293T cells. RNA from infected and uninfected cells was extracted 7 days post infection.
Contributor(s) Gupta A, Adami C
Citation(s) 26426037
Submission date Jul 10, 2015
Last update date May 15, 2019
Contact name Aditi Gupta
Organization name Rutgers University
Department Medicine
Street address 185 South Orange Ave, MSB-A920G
City Newark
State/province NEW JERSEY
ZIP/Postal code 07103
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (2)
GSM1818704 H9 infected
GSM1818705 H9 uninfected
BioProject PRJNA289529
SRA SRP060668

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Supplementary file Size Download File type/resource
GSE70785_gene_exp.diff.gz 1.5 Mb (ftp)(http) DIFF
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