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Series GSE70404 Query DataSets for GSE70404
Status Public on Feb 09, 2017
Title Investigation about Monocytes in metastatic breast cancer patients under chemotherapy +/- Avastin
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to determine if blood circulating monocytes of metastatic breast cancer patient would express a different activation profile compared to healthy donors, in order to use this specific changesas biomarkers to monitor then response to therapy
Overall design CD11b+ cells were extracted from all blood of 4 healthy donors and 4 metastatic breast cancer patients using magnetic beads separation (Miltenyi). CD11b+ cells were then lysed and mRNA was extracted to perform RNASeq.
Contributor(s) Rüegg C, Cattin S, Pradervand S
Citation(s) 26840567
Submission date Jun 30, 2015
Last update date May 15, 2019
Contact name Rüegg Curzio
Organization name Université de Fribourg
Department Département de Médecine 3
Lab Pathology
Street address Albert-Gockel 1
City Fribourg
ZIP/Postal code 1700
Country Switzerland
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (8)
GSM1726611 Healthy Patient 10
GSM1726612 Healthy Patient 12
GSM1726613 Cancer Patient 37
BioProject PRJNA288542
SRA SRP059963

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE70404_RAW.tar 1.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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