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GEO accession:
Series GSE70402
Query DataSets for GSE70402
Status
Public on Aug 01, 2015
Title
SpDamID: Marking DNA Bound by Protein Complexes Identifies Notch-Dimer Responsive Enhancers
Organism
Mus musculus
Experiment type
Genome binding/occupancy profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Other
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
26257285
Submission date
Jun 30, 2015
Last update date
May 15, 2019
Contact name
Raphael Kopan
E-mail(s)
rafi.kopan@cchmc.org
Organization name
Cincinnati Children's Hospital Medical Center
Department
Developmental Biology
Lab
Kopan
Street address
3333 Burnet Avenue
City
Cincinnati
State/province
OH
ZIP/Postal code
45229
Country
USA
Platforms (2)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL17878
NimbleGen Mouse MM9 Deluxe Promoter Array (100718_MM9_Promoter_MeDIP_HX1)
Samples (51)
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GSM1726376
DAM_1
GSM1726377
DAM_2
GSM1726378
DAM_3
GSM1726379
N1-D/RBP-AM-Ert2_1
GSM1726380
N1-D/RBP-AM-Ert2_2
GSM1726381
N1-D/RBP-AM-Ert2_3
GSM1726382
N1-D/MAML-AM-Ert2_1
GSM1726383
N1-D/MAML-AM-Ert2_2
GSM1726384
N1-D/MAML-AM-Ert2_3
GSM1726385
N1-D/p300-AM-Ert2_1
GSM1726386
N1-D/p300-AM-Ert2_2
GSM1726387
N1-D/p300-AM-Ert2_3
GSM1726388
N1-D/N1-AM-Ert2_1
GSM1726389
N1-D/N1-AM-Ert2_2
GSM1726390
Mef2c-D/MAML-AM-Ert2
GSM1726391
Mef2c-D/p300-AM-Ert2
GSM1726392
Control FAIRE_1
GSM1726393
Control FAIRE_2
GSM1726394
Control FAIRE_3
GSM1726395
N1wt FAIRE_1
GSM1726396
N1wt FAIRE_2
GSM1726397
N1wt FAIRE_3
GSM1726398
N1wt_FAIRE input
GSM1726399
N1 ChIP
GSM1726400
ChIP input
GSM1726401
DAM_1_vs_DPNII
GSM1726402
DAM_2_vs_DPNII
GSM1726403
DAM_3_vs_DPNII
GSM1726404
N1-D/RBP-AM-Ert2_1_vs_DPNII
GSM1726405
N1-D/RBP-AM-Ert2_2_vs_DPNII
GSM1726406
N1-D/RBP-AM-Ert2_3_vs_DPNII
GSM1726407
N1Dram-D/RBP-AM-Ert2+Dox_1_vs_DPNII
GSM1726408
N1Dram-D/RBP-AM-Ert2+Dox_2_vs_DPNII
GSM1726409
N1Dram-D/RBP-AM-Ert2+Dox_3_vs_DPNII
GSM1726410
N1-D/RBP-AM-Ert2+Dox_1_vs_DPNII
GSM1726411
N1-D/RBP-AM-Ert2+Dox_2_vs_DPNII
GSM1726412
N1-D/RBP-AM-Ert2+Dox_3_vs_DPNII
GSM1726413
N1-D/MAML-AM-Ert2_1_vs_DPNII
GSM1726414
N1-D/MAML-AM-Ert2_2_vs_DPNII
GSM1726415
N1-D/MAML-AM-Ert2_3_vs_DPNII
GSM1726416
N1-D/p300-AM-Ert2_1_vs_DPNII
GSM1726417
N1-D/p300-AM-Ert2_2_vs_DPNII
GSM1726418
N1-D/p300-AM-Ert2_3_vs_DPNII
GSM1726419
N1-D/N1-AM-Ert2_1_vs_DPNII
GSM1726420
N1-D/N1-AM-Ert2_2_vs_DPNII
GSM1726421
Mef2c-D/MAML-AM-Ert2_1_vs_DPNII
GSM1726422
Mef2c-D/MAML-AM-Ert2_2_vs_DPNII
GSM1726423
Mef2c-D/MAML-AM-Ert2_3_vs_DPNII
GSM1726424
Mef2c-D/p300-AM-Ert2_1_vs_DPNII
GSM1726425
Mef2c-D/p300-AM-Ert2_2_vs_DPNII
GSM1726426
Mef2c-D/p300-AM-Ert2_3_vs_DPNII
This SuperSeries is composed of the following SubSeries:
GSE70387
SpDamID: Marking DNA Bound by Protein Complexes Identifies Notch-Dimer Responsive Enhancers [next-generation sequencing]
GSE70388
SpDamID: Marking DNA Bound by Protein Complexes Identifies Notch-Dimer Responsive Enhancers [array]
Relations
BioProject
PRJNA288533
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Format
SOFT formatted family file(s)
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Supplementary file
Size
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File type/resource
GSE70402_RAW.tar
2.2 Gb
(http)
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TAR (of PAIR)
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