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Series GSE70012 Query DataSets for GSE70012
Status Public on Jun 17, 2017
Title RNA-seq profiling of glomeruli, S1 proximal tubule, and the whole kidney of uninephrecomized rats
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary We sequenced mRNAs in microdissected glomeruli and S1 proximal tubule segments and the whole remnant kidney of uninephrectomized rats.
Overall design Male Sprague-Dawley rats received either right nephrectomy or sham surgery. Rats were sacrificed 24h, 48h, and 72h after surgery. Total RNAs were isolated from microdissected glomeruli, S1 proximal tubules, and the whole left kidney for RNA sequencing.
Contributor(s) Lee JW, Knepper MA
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Submission date Jun 18, 2015
Last update date Jun 08, 2023
Contact name Jae Wook Lee
Organization name National Institutes of Health
Street address 10 Center Drive, 6N314
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (72)
GSM1715627 Nephrectomy, 24h, glomerulus, #1
GSM1715628 Nephrectomy, 24h, S1 proximal tubule, #1
GSM1715629 Nephrectomy, 24h, glomerulus, #2
BioProject PRJNA287461
SRA SRP059653

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Supplementary file Size Download File type/resource
GSE70012_unilateral_nephrectomy_G_and_S1_RPKM.txt.gz 7.1 Mb (ftp)(http) TXT
GSE70012_unilateral_nephrectomy_G_and_S1_htseqcount.txt.gz 2.3 Mb (ftp)(http) TXT
GSE70012_unilateral_nephrectomy_wholekidney_FPKM.txt.gz 3.3 Mb (ftp)(http) TXT
GSE70012_unilateral_nephrectomy_wholekidney_htseqcount.txt.gz 1.4 Mb (ftp)(http) TXT
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Processed data are available on Series record

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