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Series GSE69977 Query DataSets for GSE69977
Status Public on Mar 25, 2016
Title Fine-mapping of DNA modifications in the lactase gene region of humans and mice
Organisms Homo sapiens; Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary Bisulfite padlock probe technique was used to examine DNA modifications at the lactase gene region for human and mouse tissues
Overall design DNA modifications were investigated in human sperm, blood, jejunal enterocytes and jejunum lacking enterocytes, as well as mouse jejunal enterocytes and jejunum lacking enterocytes. For WGA samples, a genome devoid of DNA modifications was used to verify the efficiency of the bisulfite conversion reactions (the tissue sources were human or mouse intestine).
Contributor(s) Petronis A, Labrie V, Buske OJ
Citation(s) 27159559
Submission date Jun 18, 2015
Last update date May 15, 2019
Contact name Arturas Petronis
Organization name Centre for Addiction and Mental Health
Street address 250 College St Rm606
City Toronto
ZIP/Postal code M5T 1R8
Country Canada
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (387)
GSM1714666 S_2_1-1-25
GSM1714667 S_21_1-1-26
GSM1714668 S_22_1-1-27
This SubSeries is part of SuperSeries:
GSE69979 Epigenetics of lactose intolerance and lactase persistence
BioProject PRJNA287318
SRA SRP059623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69977_RAW.tar 24.4 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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