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Series GSE69749 Query DataSets for GSE69749
Status Public on Apr 11, 2016
Title Sex-specific chromatin accessibility profiling in human PBMCs
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We used ATAC-seq to profile the chromatin accessibility differences between sexes. We investigated the chromatin states of the PBMCs of twenty individuals, with an equal distribution of males and females, controlled for age (18-45 years old) and ethnicity (Caucasian).
Overall design We examined chromatin accesibility using ATAC-seq in the PBMCs of twenty individuals.
Contributor(s) Kukurba K, Montgomery S
Citation(s) 27197214
Submission date Jun 10, 2015
Last update date May 15, 2019
Contact name Stephen Montgomery
Organization name Stanford University
Street address 300 Pasteur Lane
City Stanford
ZIP/Postal code 94305
Country USA
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (20)
GSM1708250 PBMC_mergedReplicates_sample1
GSM1708251 PBMC_mergedReplicates_sample2
GSM1708252 PBMC_mergedReplicates_sample3
BioProject PRJNA286321
SRA SRP059332

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Supplementary file Size Download File type/resource
GSE69749_RAW.tar 15.8 Mb (http)(custom) TAR (of BED)
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Raw data are available in SRA
Processed data provided as supplementary file

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