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Series GSE69667 Query DataSets for GSE69667
Status Public on Mar 02, 2016
Title A systematic analysis of the time series gene expression in TGF-beta induced EMT by Next-generation sequencing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study is to characterize time course gene expression profiles during TGF-beta induced EMT. In particular, we aim to identify and characterize master transcription factors regulate the transition into partial-EMT state.
Overall design A time series mRNA profile in A549 cells is generated from TGF-beta induced EMT samples during 0h,6h,12h,24h,36h,48h,72h and 96h by deep sequencing, in duplicate, using Illumina HiSeq 2500
Contributor(s) Chang H, Xue M
Citation(s) 26926107
Submission date Jun 08, 2015
Last update date May 15, 2019
Contact name Mengzhu Xue
Organization name Shanghai Advanced Research Institute
Street address No.100, Haike Road
City Shanghai
ZIP/Postal code 201210
Country China
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (16)
GSM1706458 0h rep1
GSM1706459 0h rep2
GSM1706460 6h rep1
BioProject PRJNA286131
SRA SRP059252

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69667_RNASEQ_TPM_rep1.txt.gz 1.0 Mb (ftp)(http) TXT
GSE69667_RNASEQ_TPM_rep2.txt.gz 1.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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