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Series GSE69100 Query DataSets for GSE69100
Status Public on Oct 20, 2016
Title Reciprocal Regulation between the Circadian Clock and Hypoxic Signaling in Mammals
Organisms Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary We propose that the clock plays an important role in fine-tuning the hypoxic response under pathophysiological conditions, which can serve as a strategy to reduce the severity of fatal hypoxia-related diseases.
Overall design RNA-seq between wildtype and mutant MEF cells and Chip-seq in U2OS cells
Contributor(s) xiong w
Citation(s) 27773697
Submission date May 20, 2015
Last update date May 15, 2019
Contact name xiong wei
Organization name peking university
Street address 5 Yiheyuan Rd, Haidian, Beijing, China
City Beijing
ZIP/Postal code 100871
Country China
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (7)
GSM1692868 ChIP_hBMAL1 Chip-seq
GSM1692869 ChIP_hHIF1A Chip-seq
GSM1692870 ChIP_IgG Chip-seq
BioProject PRJNA284537
SRA SRP058548

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE69100_RAW.tar 890.3 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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