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Series GSE68349 Query DataSets for GSE68349
Status Public on Dec 04, 2015
Title ChIPseq analyses in germinal center B cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Germinal center B cells were isolated from human tonsil tissue and crosslinked. ChIP was performed on two distinct pools of germinal center cells, each obtained from 3-5 donors.
Overall design The experiment includes two biological replicates (germinal center cell pools from different donors). ChIP was performed on both pools and subject to library preparation and sequencing. Input DNA was sequenced for both pools.
Contributor(s) Basso K, Holmes AB, Dalla-Favera R
Citation(s) 26620759
Submission date Apr 28, 2015
Last update date May 15, 2019
Contact name Riccardo Dalla-Favera
Organization name Columbia University
Street address 1130 St Nicholas Avenue
City New York
State/province NY
ZIP/Postal code 10032
Country USA
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (6)
GSM1668935 CB4_FOXO1_RK059
GSM1668936 CB5_FOXO1_RK051
GSM1668937 CB4_BCL6_RK040
BioProject PRJNA282492
SRA SRP057752

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE68349_RAW.tar 390.0 Kb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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